RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 BDH2Q9BUT1 245 aa20.62■□□□□ 0.89
SYNGR3-202ENST00000562045 CST1P01037 141 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 IGKV1D-16P01601 117 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 DBIP07108 87 aaKnown RBP20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 THBS1P07996 1170 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 IL7RP16871 459 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 RPS4Y1P22090 263 aaKnown RBP20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 GCKP35557 465 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 NR0B1P51843 470 aaKnown RBP20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 TUBA3CQ13748 450 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 TUBA3EQ6PEY2 450 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 DHRS4L2Q6PKH6 230 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 SIGLEC12Q96PQ1 595 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 SEMA6AQ9H2E6 1030 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 DNAJB9Q9UBS3 223 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 TEKT2Q9UIF3 430 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 hCG_2039718K7EN88 272 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 SYT5O00445 386 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 ITGA2P17301 1181 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 TNFRSF1BP20333 461 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 CD96P40200 585 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 OR1E2P47887 323 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 LIN52Q52LA3 116 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 HMGN2P46Q86SG4 172 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 ZNF227Q86WZ6 799 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 VRK2Q86Y07 508 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 HAS2Q92819 552 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 RASL10BQ96S79 203 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 RSPO3Q9BXY4 272 aaPredicted RBP20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 SLC13A4Q9UKG4 626 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 ZNF443Q9Y2A4 671 aaPredicted RBP20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 SLC9A8Q9Y2E8 581 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 PCDHGA10Q9Y5H3 936 aa20.61■□□□□ 0.89
SYNGR3-202ENST00000562045 EML6Q6ZMW3 1958 aa20.6■□□□□ 0.89
SYNGR3-202ENST00000562045 UGT2B17O75795 530 aa20.6■□□□□ 0.89
SYNGR3-202ENST00000562045 NADKO95544 446 aaPredicted RBP20.6■□□□□ 0.89
SYNGR3-202ENST00000562045 IL33O95760 270 aa20.6■□□□□ 0.89
SYNGR3-202ENST00000562045 IFNW1P05000 195 aa20.6■□□□□ 0.89
SYNGR3-202ENST00000562045 ARG2P78540 354 aa20.6■□□□□ 0.89
SYNGR3-202ENST00000562045 PLEKHN1Q494U1 663 aaPredicted RBP20.6■□□□□ 0.89
SYNGR3-202ENST00000562045 SLC6A19Q695T7 634 aa20.6■□□□□ 0.89
SYNGR3-202ENST00000562045 ZAR1Q86SH2 424 aa20.6■□□□□ 0.89
SYNGR3-202ENST00000562045 ZADH2Q8N4Q0 377 aa20.6■□□□□ 0.89
SYNGR3-202ENST00000562045 NRG4Q8WWG1 115 aa20.6■□□□□ 0.89
SYNGR3-202ENST00000562045 KLHL28Q9NXS3 571 aa20.6■□□□□ 0.89
SYNGR3-202ENST00000562045 EXPH5Q8NEV8 1989 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 GNGT2O14610 69 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 DPM1O60762 260 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 LGI1O95970 557 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 KRT20P35900 424 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 NRG3P56975 720 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 EIPR1Q53HC9 387 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 SPINK14Q6IE38 97 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 Q6ZS92 163 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 SLC34A3Q8N130 599 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 Q8NA96 180 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 DIO2Q92813 273 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 TMBIM1Q969X1 311 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 EFHD2Q96C19 240 aaPredicted RBP20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 HES7Q9BYE0 225 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 VCX3BQ9H321 246 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 ARMC7Q9H6L4 198 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 ABCG2Q9UNQ0 655 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 COL6A6A6NMZ7 2263 aa20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 PRRC2CQ9Y520 2896 aaKnown RBP20.59■□□□□ 0.89
SYNGR3-202ENST00000562045 SPTA1P02549 2419 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 NPIPA5A0A0B4J1W7 369 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 OR5H15A6NDH6 313 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 NPIPA7E9PJI5 369 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 OR6B1O95007 311 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 NPIPA8P0DM63 369 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 NID1P14543 1247 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 LCN1P31025 176 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 DCTP40126 519 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 VHLP40337 213 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 SOX3P41225 446 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 TNFSF10P50591 281 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 PLCXD2Q0VAA5 305 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 MAPK14Q16539 360 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 IQCCQ4KMZ1 466 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 CARM1Q86X55 608 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 OIT3Q8WWZ8 545 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 ZNF347Q96SE7 839 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 HOXD1Q9GZZ0 328 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 RNF32Q9H0A6 362 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 NDUFAF4Q9P032 175 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 KCNE5Q9UJ90 142 aa20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 YARS2Q9Y2Z4 477 aaKnown RBP20.58■□□□□ 0.89
SYNGR3-202ENST00000562045 CENPVL1A0A0U1RR11 272 aa20.58■□□□□ 0.88
SYNGR3-202ENST00000562045 PRAMEF25A6NGN4 478 aa20.58■□□□□ 0.88
SYNGR3-202ENST00000562045 NEURL1O76050 574 aa20.58■□□□□ 0.88
SYNGR3-202ENST00000562045 PRSS23O95084 383 aa20.58■□□□□ 0.88
SYNGR3-202ENST00000562045 PEX2P28328 305 aa20.58■□□□□ 0.88
SYNGR3-202ENST00000562045 ATP12AP54707 1039 aa20.58■□□□□ 0.88
SYNGR3-202ENST00000562045 ZNF141Q15928 474 aa20.58■□□□□ 0.88
SYNGR3-202ENST00000562045 OGFRL1Q5TC84 451 aaPredicted RBP20.58■□□□□ 0.88
SYNGR3-202ENST00000562045 RNF220Q5VTB9 566 aa20.58■□□□□ 0.88
SYNGR3-202ENST00000562045 OR2T5Q6IEZ7 315 aa20.58■□□□□ 0.88
SYNGR3-202ENST00000562045 LYPD8Q6UX82 237 aa20.58■□□□□ 0.88
SYNGR3-202ENST00000562045 ZNF836Q6ZNA1 936 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms