RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 P4HA3Q7Z4N8 544 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 PM20D2Q8IYS1 436 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 B4GALNT2Q8NHY0 566 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 FAM110BQ8TC76 370 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 ROPN1LQ96C74 230 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 NEURL3Q96EH8 262 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 AURKBQ96GD4 344 aaPredicted RBP9.18□□□□□ -0.94
HERC1-212ENST00000561348 WDYHV1Q96HA8 205 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 DMRTA2Q96SC8 542 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 SDF2Q99470 211 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 TMEM120AQ9BXJ8 343 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 OR2B2Q9GZK3 357 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 HOXD1Q9GZZ0 328 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 PCNX3Q9H6A9 2034 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 TRIM33Q9UPN9 1127 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 WDR45Q9Y484 360 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 FAM215AQ9Y5M1 114 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 PTPN13Q12923 2485 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 USP9YO00507 2555 aaPredicted RBP9.17□□□□□ -0.94
HERC1-212ENST00000561348 AHRRA9YTQ3 701 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 B4DXG7 233 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 OIP5O43482 229 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 TNFRSF21O75509 655 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 SOX30O94993 753 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 AGR2O95994 175 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 IL2RAP01589 272 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 UBTFL6P0CB48 400 aaPredicted RBP9.17□□□□□ -0.94
HERC1-212ENST00000561348 PEPDP12955 493 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 ETFAP13804 333 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 BMP5P22003 454 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 RYKP34925 604 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 ZFP36L2P47974 494 aaKnown RBP9.17□□□□□ -0.94
HERC1-212ENST00000561348 ATP12AP54707 1039 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 LRRC74AQ0VAA2 488 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 SQLEQ14534 574 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 SF3B4Q15427 424 aaKnown RBP eCLIP9.17□□□□□ -0.943e-7■■■■□ 22.2
HERC1-212ENST00000561348 SYPL1Q16563 259 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 ZNF630Q2M218 657 aaPredicted RBP9.17□□□□□ -0.94
HERC1-212ENST00000561348 ARHGAP11BQ3KRB8 267 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 RTL6Q6ICC9 239 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 GRAMD2AQ8IUY3 354 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 MEIOBQ8N635 442 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 ANKFN1Q8N957 763 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 FADS6Q8N9I5 356 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 TNIP2Q8NFZ5 429 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 HOXB13Q92826 284 aaPredicted RBP9.17□□□□□ -0.94
HERC1-212ENST00000561348 SPDL1Q96EA4 605 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 C1GALT1C1Q96EU7 318 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 TUBA1CQ9BQE3 449 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 PIGQQ9BRB3 760 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 PRRG4Q9BZD6 226 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 FAM107BQ9H098 131 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 QRSL1Q9H0R6 528 aaKnown RBP9.17□□□□□ -0.94
HERC1-212ENST00000561348 KCNJ16Q9NPI9 418 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 MED4Q9NPJ6 270 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 SLC6A13Q9NSD5 602 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.17□□□□□ -0.94
HERC1-212ENST00000561348 ZNF337Q9Y3M9 751 aa9.17□□□□□ -0.94
HERC1-212ENST00000561348 SETXQ7Z333 2677 aaKnown RBP9.16□□□□□ -0.94
HERC1-212ENST00000561348 A0A0G2JNJ9 132 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 OR2M5A3KFT3 312 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 TMEM247A6NEH6 219 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 SERINC4A6NH21 518 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 CLCA1A8K7I4 914 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 H0YC42 278 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 HMGN4O00479 90 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 DYNC1I1O14576 645 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 EIF1AYO14602 144 aaKnown RBP9.16□□□□□ -0.94
HERC1-212ENST00000561348 ANGPT2O15123 496 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 H6PDO95479 791 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 AK1P00568 194 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 CSTAP01040 98 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 UBL4AP11441 157 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 ME2P23368 584 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 CHRNB4P30926 498 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 SFTPDP35247 375 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 ADH7P40394 386 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 ARFIP2P53365 341 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 TPD52P55327 224 aaPredicted RBP9.16□□□□□ -0.94
HERC1-212ENST00000561348 ZNF117Q03924 483 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 CHRNEQ04844 493 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 GANABQ14697 944 aaKnown RBP9.16□□□□□ -0.94
HERC1-212ENST00000561348 ACSF3Q4G176 576 aaPredicted RBP9.16□□□□□ -0.94
HERC1-212ENST00000561348 CBLN3Q6UW01 205 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 MISPQ8IVT2 679 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 GCNT2Q8N0V5 402 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 PHF10Q8WUB8 498 aaKnown RBP9.16□□□□□ -0.94
HERC1-212ENST00000561348 ASB5Q8WWX0 329 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 RNF145Q96MT1 663 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 KLHDC3Q9BQ90 382 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 RABEP2Q9H5N1 569 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 TPT1P8Q9HAU6 139 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 CACYBPQ9HB71 228 aaKnown RBP9.16□□□□□ -0.94
HERC1-212ENST00000561348 MED17Q9NVC6 651 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 Q9UFV3 132 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 DTNAQ9Y4J8 743 aa9.16□□□□□ -0.94
HERC1-212ENST00000561348 CENPVL1A0A0U1RR11 272 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 EEF1E1-BLOC1S5C9J1V9 151 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 C5orf58C9J3I9 102 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 C19orf84I3L1E1 186 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms