RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 CNOT3O75175 753 aaKnown RBP15.78■□□□□ 0.12
HDDC3-206ENST00000561036 TFAP2AP05549 437 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 NGFRP08138 427 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 GKN3PP0CG01 181 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 PRG2P13727 222 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 POU2F1P14859 743 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 ZNF28P17035 718 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 ENDOUP21128 410 aaKnown RBP15.78■□□□□ 0.12
HDDC3-206ENST00000561036 TBXA2RP21731 343 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 CRHBPP24387 322 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 HTR2AP28223 471 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 ELK4P28324 431 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 KRT20P35900 424 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 HOXC5Q00444 222 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 INSM1Q01101 510 aaPredicted RBP15.78■□□□□ 0.12
HDDC3-206ENST00000561036 PLAURQ03405 335 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 MAD2L1BPQ15013 274 aaPredicted RBP15.78■□□□□ 0.12
HDDC3-206ENST00000561036 MEP1AQ16819 746 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 FAAH2Q6GMR7 532 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 LCN10Q6JVE6 187 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 ISLR2Q6UXK2 745 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 MBOAT2Q6ZWT7 520 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 CPEB2Q7Z5Q1 589 aaKnown RBP15.78■□□□□ 0.12
HDDC3-206ENST00000561036 SLC34A3Q8N130 599 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 ZNF614Q8N883 585 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 LSMEM1Q8N8F7 131 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 OR4C3Q8NH37 302 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 OR8K3Q8NH51 312 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 VMP1Q96GC9 406 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 LIN37Q96GY3 246 aaPredicted RBP15.78■□□□□ 0.12
HDDC3-206ENST00000561036 GAL3ST4Q96RP7 486 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 LPAR4Q99677 370 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 ULBP3Q9BZM4 244 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 LOXL2Q9Y4K0 774 aa15.78■□□□□ 0.12
HDDC3-206ENST00000561036 RALGAPA1Q6GYQ0 2036 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 MPZL2O60487 215 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 FOXD2O60548 495 aaPredicted RBP15.77■□□□□ 0.12
HDDC3-206ENST00000561036 LYPD3O95274 346 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 UTS2O95399 124 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 CSTAP01040 98 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 THY1P04216 161 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 CDK4P11802 303 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 ATP6V1B1P15313 513 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 MMP11P24347 488 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 CHMP24386 653 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 ACAA2P42765 397 aaKnown RBP15.77■□□□□ 0.12
HDDC3-206ENST00000561036 PNLIPRP2P54317 469 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 RNF4P78317 190 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 SPEM2Q0P670 501 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 FOXD4Q12950 439 aaPredicted RBP15.77■□□□□ 0.12
HDDC3-206ENST00000561036 TSPAN31Q12999 210 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 PTGES3Q15185 160 aaKnown RBP15.77■□□□□ 0.12
HDDC3-206ENST00000561036 FNDC7Q5VTL7 733 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 PAPD4Q6PIY7 484 aaKnown RBP15.77■□□□□ 0.12
HDDC3-206ENST00000561036 FAM198BQ6UWH4 519 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 HSDL2Q6YN16 418 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 SLCO6A1Q86UG4 719 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 CCDC71Q8IV32 467 aaPredicted RBP15.77■□□□□ 0.12
HDDC3-206ENST00000561036 FAM71CQ8NEG0 241 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 NUBPLQ8TB37 319 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 MR1Q95460 341 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 EFHD2Q96C19 240 aaPredicted RBP15.77■□□□□ 0.12
HDDC3-206ENST00000561036 HS6ST2Q96MM7 605 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 DDA1Q9BW61 102 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 ADNPQ9H2P0 1102 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 EXOSC3Q9NQT5 275 aaKnown RBP15.77■□□□□ 0.12
HDDC3-206ENST00000561036 SLC7A7Q9UM01 511 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 NTNG1Q9Y2I2 539 aa15.77■□□□□ 0.12
HDDC3-206ENST00000561036 ASCC3Q8N3C0 2202 aaKnown RBP15.76■□□□□ 0.11
HDDC3-206ENST00000561036 LOC102723996A0A087X1L8 192 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 SLC1A7O00341 560 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 SCDO00767 359 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 TSPAN2O60636 221 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 BCAS1O75363 584 aaPredicted RBP15.76■□□□□ 0.11
HDDC3-206ENST00000561036 ANGPTL1O95841 491 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 HPGDP15428 266 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 FPR3P25089 353 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 IL12BP29460 328 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 STAT5AP42229 794 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 GSSP48637 474 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 NR0B1P51843 470 aaKnown RBP15.76■□□□□ 0.11
HDDC3-206ENST00000561036 CDC42P60953 191 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 EIF3IQ13347 325 aaKnown RBP15.76■□□□□ 0.11
HDDC3-206ENST00000561036 ISXQ2M1V0 245 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 SLX4IPQ5VYV7 408 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 LAIR2Q6ISS4 152 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 ZNF773Q6PK81 442 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 NKAIN4Q8IVV8 208 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 APCDD1LQ8NCL9 501 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 OR5L2Q8NGL0 311 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 RHOXF1Q8NHV9 184 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 WDR36Q8NI36 951 aaKnown RBP15.76■□□□□ 0.11
HDDC3-206ENST00000561036 RNF31Q96EP0 1072 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 MPP4Q96JB8 637 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 TAAR9Q96RI9 348 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 CCNL2Q96S94 520 aaPredicted RBP15.76■□□□□ 0.11
HDDC3-206ENST00000561036 WDR77Q9BQA1 342 aaPredicted RBP15.76■□□□□ 0.11
HDDC3-206ENST00000561036 PRSS27Q9BQR3 290 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 TPRKBQ9Y3C4 175 aa15.76■□□□□ 0.11
HDDC3-206ENST00000561036 LAMA1P25391 3075 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms