RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 NPR2P20594 1047 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 BCKDHBP21953 392 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 ITPKAP23677 461 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 MAPK3P27361 379 aaPredicted RBP8.01□□□□□ -1.13
CCDC33-209ENST00000560565 ATP6V1E1P36543 226 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 SLC1A3P43003 542 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 OR1E2P47887 323 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 KCNJ5P48544 419 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 DHPSP49366 369 aaPredicted RBP8.01□□□□□ -1.13
CCDC33-209ENST00000560565 CRYBA2P53672 197 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 RPS7P62081 194 aaKnown RBP8.01□□□□□ -1.13
CCDC33-209ENST00000560565 POU4F2Q12837 409 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 MAP4K2Q12851 820 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 TSPAN31Q12999 210 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 GINS1Q14691 196 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 NTRK2Q16620 822 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 ZNF311Q5JNZ3 666 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 METTL11BQ5VVY1 283 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 FAM205BPQ63HN1 556 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 KIAA1161Q6NSJ0 714 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 KIAA1324Q6UXG2 1013 aaKnown RBP8.01□□□□□ -1.13
CCDC33-209ENST00000560565 CEACAM20Q6UY09 585 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 RTL4Q6ZR62 310 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 PLEKHM3Q6ZWE6 761 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 PRSS42Q7Z5A4 293 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 HSD11B1LQ7Z5J1 315 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 TSEN54Q7Z6J9 526 aaKnown RBP8.01□□□□□ -1.13
CCDC33-209ENST00000560565 CMIPQ8IY22 773 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 TMEFF1Q8IYR6 380 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 FRMD1Q8N878 549 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 ZNF366Q8N895 744 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 TEX19Q8NA77 164 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 SYT14Q8NB59 555 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 OR52P1PQ8NH57 321 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 HUS1BQ8NHY5 278 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.01□□□□□ -1.13
CCDC33-209ENST00000560565 SLC7A13Q8TCU3 470 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 ASB12Q8WXK4 309 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 TM9SF4Q92544 642 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 MAL2Q969L2 176 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 UPRTQ96BW1 309 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 SIPA1Q96FS4 1042 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 ZNF514Q96K75 400 aaPredicted RBP8.01□□□□□ -1.13
CCDC33-209ENST00000560565 MRGPRX1Q96LB2 322 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 MTERF1Q99551 399 aaKnown RBP8.01□□□□□ -1.13
CCDC33-209ENST00000560565 THAP7Q9BT49 309 aaPredicted RBP8.01□□□□□ -1.13
CCDC33-209ENST00000560565 ZNF436Q9C0F3 470 aaPredicted RBP8.01□□□□□ -1.13
CCDC33-209ENST00000560565 PCBD2Q9H0N5 130 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 SLC6A17Q9H1V8 727 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 MTG2Q9H4K7 406 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 BCL2L10Q9HD36 194 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 NLGN3Q9NZ94 848 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 ZNF224Q9NZL3 707 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 PTGFRNQ9P2B2 879 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 EXTL2Q9UBQ6 330 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 MBD1Q9UIS9 605 aaPredicted RBP8.01□□□□□ -1.13
CCDC33-209ENST00000560565 TSR3Q9UJK0 312 aaKnown RBP8.01□□□□□ -1.13
CCDC33-209ENST00000560565 ZNF222Q9UK12 451 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 ADAM29Q9UKF5 820 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 BAIAP2Q9UQB8 552 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 EXOGQ9Y2C4 368 aaKnown RBP8.01□□□□□ -1.13
CCDC33-209ENST00000560565 BOLA1Q9Y3E2 137 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 MAP4K5Q9Y4K4 846 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 PRSS21Q9Y6M0 314 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 LRP4O75096 1905 aa8.01□□□□□ -1.13
CCDC33-209ENST00000560565 ARHGEF17Q96PE2 2063 aaPredicted RBP8.01□□□□□ -1.13
CCDC33-209ENST00000560565 CEP295Q9C0D2 2601 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 HEATR5BQ9P2D3 2071 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 A0A0G2JPF8 293 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 A0A0U1RQS6 177 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 ARHGEF33A8MVX0 844 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 TMEM229AB2RXF0 380 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 HNRNPCL2B2RXH8 293 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 HNRNPCL3B7ZW38 293 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 LRRN3E7EW58 273 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 ZNF749O43361 778 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 GSTZ1O43708 216 aaPredicted RBP8□□□□□ -1.13
CCDC33-209ENST00000560565 PLOD3O60568 738 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 TSC22D2O75157 780 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 GCM2O75603 506 aaPredicted RBP8□□□□□ -1.13
CCDC33-209ENST00000560565 SC5DO75845 299 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 ARL6IP5O75915 188 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 RGS11O94810 467 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 IGHA1P01876 353 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 OPN1SWP03999 348 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 HNRNPCL4P0DMR1 293 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 C1GALT1C1LP0DN25 315 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 NAGAP17050 411 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 DDCP20711 480 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 SDHBP21912 280 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 AHCYP23526 432 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 DNASE1P24855 282 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 APEX1P27695 318 aaKnown RBP8□□□□□ -1.13
CCDC33-209ENST00000560565 HTR1FP30939 366 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 MPLP40238 635 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 ARFIP1P53367 373 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 CDH11P55287 796 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 GMFBP60983 142 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 ACTC1P68032 377 aa8□□□□□ -1.13
CCDC33-209ENST00000560565 ACTA1P68133 377 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 254.5 ms