RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 GXYLT2A0PJZ3 443 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 FAM187AA6NFU0 413 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 ZNF500O60304 480 aaPredicted RBP17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 LMX1BO60663 402 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 SMIM24O75264 130 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 NGFRP08138 427 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 SBK3P0C264 359 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 SHC1P29353 583 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 HSD17B3P37058 310 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 MAP3K8P41279 467 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 MAGEA12P43365 314 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 RFX3P48380 749 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 RNPS1Q15287 305 aaKnown RBP17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 PDSS1Q5T2R2 415 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 BHLHA15Q7RTS1 189 aaPredicted RBP17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 TDRPQ86YL5 185 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 LILRA2Q8N149 483 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 TMEM151AQ8N4L1 468 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 ZNF525Q8N782 197 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 HOXB13Q92826 284 aaPredicted RBP17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 ELP4Q96EB1 424 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 KLHL15Q96M94 604 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 SRXN1Q9BYN0 137 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 ACPTQ9BZG2 426 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 RNF14Q9UBS8 474 aa17.5■□□□□ 0.39
RABGGTA-214ENST00000560163 NDUFB5O43674 189 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 EFNA2O43921 213 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 DLX3O60479 287 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 YES1P07947 543 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 ZNF16P17020 682 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 SRD5A1P18405 259 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 DDCP20711 480 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 IGFBP5P24593 272 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 TIA1P31483 386 aaKnown RBP eCLIP17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 TTKP33981 857 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 GABRA3P34903 492 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 NCBP2P52298 156 aaKnown RBP eCLIP17.49■□□□□ 0.391e-10■■■□□ 14.8
RABGGTA-214ENST00000560163 PLTPP55058 493 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 MANFP55145 182 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 CDH11P55287 796 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 SLC18A2Q05940 514 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 PPA1Q15181 289 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 ZNHIT3Q15649 155 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 SPIN4Q56A73 249 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 Q6ZT83 130 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 CCDC25Q86WR0 208 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 CDYL2Q8N8U2 506 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 FBXO25Q8TCJ0 367 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 C10orf105Q8TEF2 133 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 GLIPR2Q9H4G4 154 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 CBLN4Q9NTU7 201 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 SIRT5Q9NXA8 310 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 NPAP1Q9NZP6 1156 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 GRID1Q9ULK0 1009 aa17.49■□□□□ 0.39
RABGGTA-214ENST00000560163 E7EQL1 145 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 ABCD4O14678 606 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 RAD51CO43502 376 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 PRKD3O94806 890 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 OXSR1O95747 527 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 KRT6AP02538 564 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 KRT6BP04259 564 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 LINGO3P0C6S8 592 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 PYGBP11216 843 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 ME2P23368 584 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 PAFAH1B1P43034 410 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 KRT6CP48668 564 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 Q6ZSR9 355 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 C17orf53Q8N3J3 647 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 CEP112Q8N8E3 955 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 PIK3R3Q92569 461 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 HTRA1Q92743 480 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 PROX1Q92786 737 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 CPNE4Q96A23 557 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 MANSC1Q9H8J5 431 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 C3orf14Q9HBI5 128 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 HHATLQ9HCP6 504 aa17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 DDX18Q9NVP1 670 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 ING1Q9UK53 422 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-214ENST00000560163 SLC35F4A4IF30 521 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 TTC36A6NLP5 189 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 UBFD1O14562 309 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 ULK1O75385 1050 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 KCNH1O95259 989 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 IFI6P09912 130 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 GSTM5P46439 218 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 CLCQ05315 142 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 RUNX1T1Q06455 604 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 ACSM2AQ08AH3 577 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 SLC29A2Q14542 456 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 RAB35Q15286 201 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 TRADDQ15628 312 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 ACSM2BQ68CK6 577 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 ZDHHC24Q6UX98 284 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 FAM110BQ8TC76 370 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 FAM168AQ92567 244 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 REXO5Q96IC2 774 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 RADILQ96JH8 1075 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 AMDHD1Q96NU7 426 aa17.47■□□□□ 0.39
RABGGTA-214ENST00000560163 EBPLQ9BY08 206 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms