RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 TMEM185BQ9H7F4 350 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 NOL11Q9H8H0 719 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 PFDN4Q9NQP4 134 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 KLHL13Q9P2N7 655 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 SLC12A4Q9UP95 1085 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 WNK2Q9Y3S1 2297 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 H7C417 338 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 IL33O95760 270 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 ANGPTL1O95841 491 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 CSF3P09919 207 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 ARL1P40616 181 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 CLK3P49761 638 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 EFNA4P52798 201 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 C17orf67Q0P5P2 114 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 ZNF155Q12901 538 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 CSTF3Q12996 717 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 IFT88Q13099 833 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 GGTLC2Q14390 218 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 STK11Q15831 433 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 CR1LQ2VPA4 569 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 SGO1Q5FBB7 561 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 MROH9Q5TGP6 573 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 TTC19Q6DKK2 380 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 B3GLCTQ6Y288 498 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 Q6ZSR9 355 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 TDRPQ86YL5 185 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 KCTD4Q8WVF5 259 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 FARSBQ9NSD9 589 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 TAS2R9Q9NYW1 312 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 NOTCH1P46531 2555 aa11.32□□□□□ -0.6
RABGGTA-213ENST00000560127 NUP214P35658 2090 aaPredicted RBP11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 LYZL6O75951 148 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 UTS2O95399 124 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 C2P06681 752 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 SHC1P29353 583 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 CRABP2P29373 138 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 PHBP35232 272 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 CCNG1P51959 295 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 CARD18P57730 90 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 VSNL1P62760 191 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 TRA2BP62995 288 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 PRR5P85299 388 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 SPOCK1Q08629 439 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 TRAF3Q13114 568 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 RNPS1Q15287 305 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 ZNF239Q16600 458 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 DECR1Q16698 335 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 PLPPR5Q32ZL2 321 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 FAM219BQ5XKK7 198 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 FBXL14Q8N1E6 418 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 PLD6Q8N2A8 252 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 PIAS4Q8N2W9 510 aaPredicted RBP11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 C1orf52Q8N6N3 182 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 SLC9A6Q92581 669 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 ATP6V1E2Q96A05 226 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 EXOSC8Q96B26 276 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 RADILQ96JH8 1075 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 RNF145Q96MT1 663 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 SRXN1Q9BYN0 137 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 TBL1XR1Q9BZK7 514 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 TSPYL1Q9H0U9 437 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 TNPO3Q9Y5L0 923 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 VWFP04275 2813 aa11.31□□□□□ -0.6
RABGGTA-213ENST00000560127 A0A087WZY1 265 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 IGHV4-61A0A0C4DH41 118 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 A0A1W2PRB8 838 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 C7orf72A4D263 438 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 ESRRBO95718 433 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 TGFAP01135 160 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 PDYNP01213 254 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 SHBGP04278 402 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 IL3P08700 152 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 PABPC4LP0CB38 370 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 APEHP13798 732 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 NR4A2P43354 598 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 RFX3P48380 749 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 GRAMD1BQ3KR37 738 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 PDSS1Q5T2R2 415 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 CPTPQ5TA50 214 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 METTL2BQ6P1Q9 378 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 Q6ZT83 130 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 TRMT10CQ7L0Y3 403 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 EIF1ADQ8N9N8 165 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 OR2W6PQ8NHA6 318 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 SGMS2Q8NHU3 365 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 POC1BQ8TC44 478 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 MZB1Q8WU39 189 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 ZBTB8AQ96BR9 441 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 C3orf49Q96BT1 292 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 MUCL1Q96DR8 90 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 KLHL15Q96M94 604 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 NSUN5Q96P11 429 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 KLHDC3Q9BQ90 382 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 ELOVL6Q9H5J4 265 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 MED17Q9NVC6 651 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 CPSF2Q9P2I0 782 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 PRSS50Q9UI38 385 aa11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 V9GYY5 206 aaPredicted RBP11.3□□□□□ -0.6
RABGGTA-213ENST00000560127 A0A087WUV0 522 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms