RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 TNFRSF21O75509 655 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 HSPA4LO95757 839 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 DHRS4L1P0CG22 281 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 BGNP21810 368 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 HBA1P69905 142 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 PHC1P78364 1004 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 ZNF117Q03924 483 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 TOMM34Q15785 309 aaPredicted RBP15.92■□□□□ 0.14
HDDC3-205ENST00000559898 VPS26BQ4G0F5 336 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 OR4F3Q6IEY1 312 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 PPP4R4Q6NUP7 873 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 CDC73Q6P1J9 531 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 LRIG3Q6UXM1 1119 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 ZNF550Q7Z398 422 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 GOT1L1Q8NHS2 421 aaPredicted RBP15.92■□□□□ 0.14
HDDC3-205ENST00000559898 PSMA8Q8TAA3 256 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 OR5P2Q8WZ92 322 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 WFIKKN1Q96NZ8 548 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 ZIM3Q96PE6 472 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 BTBD2Q9BX70 525 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 CXXC4Q9H2H0 198 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 PIGMQ9H3S5 423 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 PIGUQ9H490 435 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 AKTIPQ9H8T0 292 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 KLHL28Q9NXS3 571 aa15.92■□□□□ 0.14
HDDC3-205ENST00000559898 C6orf203Q9P0P8 240 aaPredicted RBP15.92■□□□□ 0.14
HDDC3-205ENST00000559898 A0A0J9YW62 118 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 CXCL13O43927 109 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 DIAPH2O60879 1101 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 NGFRP08138 427 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 MAPK1P28482 360 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 SERPINB5P36952 375 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 EIF1AXP47813 144 aaKnown RBP15.91■□□□□ 0.14
HDDC3-205ENST00000559898 ABCE1P61221 599 aaKnown RBP15.91■□□□□ 0.14
HDDC3-205ENST00000559898 PGS1Q32NB8 556 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 GLYR1Q49A26 553 aaPredicted RBP15.91■□□□□ 0.14
HDDC3-205ENST00000559898 TNFAIP8L3Q5GJ75 292 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 ANKRD34AQ69YU3 496 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 PAMR1Q6UXH9 720 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 CHMP1BQ7LBR1 199 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 OR10D3Q8NH80 312 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 OR7D2Q96RA2 312 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 DUSP26Q9BV47 211 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 UBQLN4Q9NRR5 601 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 PNPOQ9NVS9 261 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 KCNE5Q9UJ90 142 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 TESMINQ9Y4I5 508 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 AP4B1Q9Y6B7 739 aa15.91■□□□□ 0.14
HDDC3-205ENST00000559898 TNFSF11O14788 317 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 MSTNO14793 375 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 RGS16O15492 202 aaPredicted RBP15.9■□□□□ 0.14
HDDC3-205ENST00000559898 ATE1O95260 518 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 LINGO3P0C6S8 592 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 PEX19P40855 299 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 FOXF1Q12946 379 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 DCST2Q5T1A1 773 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 FBXW10Q5XX13 1052 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 ZCCHC12Q6PEW1 402 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 GTPBP8Q8N3Z3 284 aaPredicted RBP15.9■□□□□ 0.14
HDDC3-205ENST00000559898 STACQ99469 402 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 FOXC2Q99958 501 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 ACTRT3Q9BYD9 372 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 CENPHQ9H3R5 247 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 DUSP22Q9NRW4 184 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 CARD8Q9Y2G2 431 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 PRR14LQ5THK1 2151 aa15.9■□□□□ 0.14
HDDC3-205ENST00000559898 DEFB108AA8MXU0 73 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 NPIPB9F8W1W9 429 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 CFLARO15519 480 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 ZNF500O60304 480 aaPredicted RBP15.89■□□□□ 0.13
HDDC3-205ENST00000559898 SCN2BO60939 215 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 NTN1O95631 604 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 SERPINE1P05121 402 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 CD1EP15812 388 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 SOAT1P35610 550 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 CD79BP40259 229 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 CLDN8P56748 225 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 EMX2Q04743 252 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 SGCBQ16585 318 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 SPDYE7PQ495Y7 208 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 KLHL26Q53HC5 615 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 CEP85LQ5SZL2 805 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 ANKRD46Q86W74 232 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 B4GALNT2Q8NHY0 566 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 PPP1R14CQ8TAE6 165 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 PHOSPHO1Q8TCT1 267 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 ROBO4Q8WZ75 1007 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 NINJ1Q92982 152 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 DACH2Q96NX9 599 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 TMUB1Q9BVT8 246 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 SRXN1Q9BYN0 137 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 BHLHE41Q9C0J9 482 aaPredicted RBP15.89■□□□□ 0.13
HDDC3-205ENST00000559898 ACBD3Q9H3P7 528 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 RAB21Q9UL25 225 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 ZNF175Q9Y473 711 aa15.89■□□□□ 0.13
HDDC3-205ENST00000559898 A0A1W2PQD3 144 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 C9JVG2 144 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 SCDO00767 359 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 ANKRD28O15084 1053 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 FCMRO60667 390 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms