RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 BMP5P22003 454 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 CHMP24386 653 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 ZNF136P52737 540 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 SUCLG1P53597 346 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 AQP5P55064 265 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 CLDN15P56746 228 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 CLDN20P56880 219 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 ZNF117Q03924 483 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 TFF3Q07654 80 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 SNTB1Q13884 538 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 RCAN2Q14206 197 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 GPR68Q15743 365 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 GSTA3Q16772 222 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 GTDC1Q4AE62 458 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 TIGD2Q4W5G0 525 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 NSUN5P2Q63ZY6 315 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 CBLN3Q6UW01 205 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 MEX3BQ6ZN04 569 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 ZNF621Q6ZSS3 439 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 C16orf62Q7Z3J2 963 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 LSRQ86X29 649 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 RNF130Q86XS8 419 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 MCEMP1Q8IX19 187 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 CKAP2Q8WWK9 683 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 XAGE5Q8WWM1 108 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 NEURL3Q96EH8 262 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 KCNJ16Q9NPI9 418 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 TCF7L2Q9NQB0 619 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 SDR39U1Q9NRG7 319 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 KCNE5Q9UJ90 142 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 MKLN1Q9UL63 735 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 CARD8Q9Y2G2 431 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 CENPEQ02224 2701 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 PRAMEF27A3QJZ7 478 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 CD8B2A6NJW9 211 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 NPIPB9F8W1W9 429 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 HCRTR2O43614 444 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 CD1EP15812 388 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 LCN1P31025 176 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 CEACAM8P31997 349 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 ATP12AP54707 1039 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 FUT5Q11128 374 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 FOXF2Q12947 444 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 GANABQ14697 944 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 ARHGAP11BQ3KRB8 267 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 KLHL26Q53HC5 615 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 COX20Q5RI15 118 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 PDZK1Q5T2W1 519 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 POMZP3Q6PJE2 187 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 MIER2Q8N344 545 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 GOT1L1Q8NHS2 421 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 B4GALNT2Q8NHY0 566 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 RFWD2Q8NHY2 731 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 ZPLD1Q8TCW7 415 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 VPS33AQ96AX1 596 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 DTNBP1Q96EV8 351 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 MAGEB18Q96M61 343 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 TMEM185BQ9H7F4 350 aa13.4□□□□□ -0.26
RABGGTA-211ENST00000559850 HEATR5AQ86XA9 2040 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 A0A1W2PQD3 144 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 MBD3L4A6NDZ8 208 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 MBD3L3A6NE82 208 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 MBD3L5A6NJ08 208 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 DUXAA6NLW8 204 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 HSPB2A8KAH6 182 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 POLR3GO15318 223 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 TGM6O95932 706 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 IL2RAP01589 272 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 IL11P20809 199 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 TIMP3P35625 211 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 KHKP50053 298 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 POLR2JP52435 117 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 HSPB2Q16082 182 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 MAPK14Q16539 360 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 TMEM44Q2T9K0 475 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 PLPPR5Q32ZL2 321 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 HEPHL1Q6MZM0 1159 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 GCNT2Q8N0V5 402 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 TMCO5AQ8N6Q1 288 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 GLB1L3Q8NCI6 653 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 CHDHQ8NE62 594 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 MBD3L2Q8NHZ7 208 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 POC1BQ8TC44 478 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 MIPOL1Q8TD10 442 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 ZNF524Q96C55 264 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 ROPN1LQ96C74 230 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 ZNF845Q96IR2 970 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 RNF145Q96MT1 663 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 PIGQQ9BRB3 760 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 CALHM2Q9HA72 323 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 MED17Q9NVC6 651 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 EXD2Q9NVH0 621 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 ZIM2Q9NZV7 527 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 CLCF1Q9UBD9 225 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 DTNAQ9Y4J8 743 aa13.39□□□□□ -0.27
RABGGTA-211ENST00000559850 INTS1Q8N201 2190 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 GTPBP1O00178 669 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 HMGN4O00479 90 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 RFXANKO14593 260 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 BCAS1O75363 584 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms