RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 OTCP00480 354 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 IL3P08700 152 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 RBP1P09455 135 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 COL6A2P12110 1019 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 TAC1P20366 129 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 CRYGSP22914 178 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 DPP4P27487 766 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 UGT2B10P36537 528 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 CD79BP40259 229 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 CPA2P48052 419 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 ALDH9A1P49189 494 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 SERPINB9P50453 376 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 PNLIPRP2P54317 469 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 CLDN20P56880 219 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 LINC00310P59036 64 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 GAB1Q13480 694 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 BCL2A1Q16548 175 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 TMEM44Q2T9K0 475 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 GALNTL6Q49A17 601 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 ZNF678Q5SXM1 525 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 SHEQ5VZ18 495 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 FBXW10Q5XX13 1052 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 KLC3Q6P597 504 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 ENPP6Q6UWR7 440 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 APOOLQ6UXV4 268 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 LARP4Q71RC2 724 aaKnown RBP eCLIP5.21□□□□□ -1.58
USP3-215ENST00000559771 ZNF550Q7Z398 422 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 LRRC75A-AS1Q8N1F1 130 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 CDYL2Q8N8U2 506 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 OR5M1Q8NGP8 315 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 RAB3IL1Q8TBN0 382 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 LRRC8CQ8TDW0 803 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 C16orf78Q8WTQ4 265 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 SELENOMQ8WWX9 145 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 EXOSC8Q96B26 276 aaKnown RBP5.21□□□□□ -1.58
USP3-215ENST00000559771 EFHD2Q96C19 240 aaPredicted RBP5.21□□□□□ -1.58
USP3-215ENST00000559771 TMCO6Q96DC7 493 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 ERP27Q96DN0 273 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 ZNF845Q96IR2 970 aaPredicted RBP5.21□□□□□ -1.58
USP3-215ENST00000559771 SFXN2Q96NB2 322 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 TMEM237Q96Q45 408 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 KCNA7Q96RP8 456 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 PAFAH2Q99487 392 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 NPAS1Q99742 590 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 ELAC2Q9BQ52 826 aaKnown RBP5.21□□□□□ -1.58
USP3-215ENST00000559771 KLHDC3Q9BQ90 382 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 MRPL57Q9BQC6 102 aaKnown RBP5.21□□□□□ -1.58
USP3-215ENST00000559771 ACPTQ9BZG2 426 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 OPN3Q9H1Y3 402 aaPredicted RBP5.21□□□□□ -1.58
USP3-215ENST00000559771 MRPL46Q9H2W6 279 aaKnown RBP5.21□□□□□ -1.58
USP3-215ENST00000559771 DSN1Q9H410 356 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 ELOVL6Q9H5J4 265 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 RNF122Q9H9V4 155 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 MKS1Q9NXB0 559 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 TMEM216Q9P0N5 145 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 VPS29Q9UBQ0 182 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 PRODH2Q9UF12 536 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 MCM8Q9UJA3 840 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 UTS2RQ9UKP6 389 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 TMCO1Q9UM00 188 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 CFL2Q9Y281 166 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 ZNF337Q9Y3M9 751 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 USH1CQ9Y6N9 552 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 DSCAMO60469 2012 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 OR2M5A3KFT3 312 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 SLC22A20A6NK97 555 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 MYO1GB0I1T2 1018 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 TRIM49D1C9J1S8 452 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 POC1B-GALNT4F8VUJ3 575 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 ETV2O00321 342 aaPredicted RBP5.2□□□□□ -1.58
USP3-215ENST00000559771 UPK1AO00322 258 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 UBFD1O14562 309 aaKnown RBP5.2□□□□□ -1.58
USP3-215ENST00000559771 EMC8O43402 210 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 KLF4O43474 513 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 SCO2O43819 266 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 PCDH7O60245 1069 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 SMIM24O75264 130 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 GUCY1B2O75343 617 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 TNFRSF21O75509 655 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 AQP8O94778 261 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 PLAUP00749 431 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 IGKV1D-16P01601 117 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 CRHP06850 196 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 INHBAP08476 426 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 SNRPAP09012 282 aaKnown RBP5.2□□□□□ -1.58
USP3-215ENST00000559771 HSD3B1P14060 373 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 PAX1P15863 534 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 KRT4P19013 534 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 HSD3B2P26439 372 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 ADSLP30566 484 aaPredicted RBP5.2□□□□□ -1.58
USP3-215ENST00000559771 EVI2BP34910 448 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 CPOXP36551 454 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 ARL1P40616 181 aaPredicted RBP5.2□□□□□ -1.58
USP3-215ENST00000559771 MAP3K8P41279 467 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 SLC6A8P48029 635 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 FOXA1P55317 472 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 DSCR4P56555 118 aaPredicted RBP5.2□□□□□ -1.58
USP3-215ENST00000559771 CLCQ05315 142 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 SLC18A2Q05940 514 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 BNIP1Q12981 228 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms