RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 SLC28A2O43868 658 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 HS6ST1O60243 411 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 DNAJA2O60884 412 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 NR2F1P10589 423 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 ENDOUP21128 410 aaKnown RBP8.23□□□□□ -1.09
HMG20A-209ENST00000559728 PGM1P36871 562 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 ADH7P40394 386 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 PSME3P61289 254 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 KCNJ2P63252 427 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 EEF1A1P68104 462 aaKnown RBP8.23□□□□□ -1.09
HMG20A-209ENST00000559728 CBX1P83916 185 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 CDK6Q00534 326 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 FGFBP1Q14512 234 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 GPR68Q15743 365 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 GPAT3Q53EU6 434 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 ATAD3BQ5T9A4 648 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 PRAMEF8Q5VWM4 474 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 PRAMEF7Q5VXH5 474 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 BNC2Q6ZN30 1099 aaPredicted RBP8.23□□□□□ -1.09
HMG20A-209ENST00000559728 RINLQ6ZS11 566 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 GATSQ8NAP1 163 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 RBM15BQ8NDT2 890 aaKnown RBP8.23□□□□□ -1.09
HMG20A-209ENST00000559728 OR2M3Q8NG83 312 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 DUSP19Q8WTR2 217 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 FAR1Q8WVX9 515 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 NR4A3Q92570 626 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 MIB2Q96AX9 1013 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 SLC7A6OSQ96CW6 309 aaPredicted RBP8.23□□□□□ -1.09
HMG20A-209ENST00000559728 ARSGQ96EG1 525 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 NSL1Q96IY1 281 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 HOPXQ9BPY8 73 aaPredicted RBP8.23□□□□□ -1.09
HMG20A-209ENST00000559728 WFDC6Q9BQY6 131 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 RAD21L1Q9H4I0 556 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 PIF1Q9H611 641 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 METTL7AQ9H8H3 244 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 THUMPD1Q9NXG2 353 aaKnown RBP8.23□□□□□ -1.09
HMG20A-209ENST00000559728 KLRF1Q9NZS2 232 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 SUCOQ9UBS9 1254 aaKnown RBP8.23□□□□□ -1.09
HMG20A-209ENST00000559728 ICAM5Q9UMF0 924 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 L3MBTL1Q9Y468 752 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 LIPGQ9Y5X9 500 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 GPC6Q9Y625 555 aaPredicted RBP8.23□□□□□ -1.09
HMG20A-209ENST00000559728 RELNP78509 3460 aa8.23□□□□□ -1.09
HMG20A-209ENST00000559728 NUP214P35658 2090 aaPredicted RBP8.23□□□□□ -1.09
HMG20A-209ENST00000559728 A0A0G2JPF8 293 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 SERINC4A6NH21 518 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 TTLL8A6PVC2 850 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 FAM220BPB1ANY3 271 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 HNRNPCL2B2RXH8 293 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 HNRNPCL3B7ZW38 293 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 LCE2BO14633 110 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 ZNHIT1O43257 154 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 ZIC3O60481 467 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 TPST1O60507 370 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 HNRNPCL1O60812 293 aaKnown RBP8.22□□□□□ -1.09
HMG20A-209ENST00000559728 IGHG3P01860 377 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 HNRNPCL4P0DMR1 293 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 ATP6V1C1P21283 382 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 PCGF2P35227 344 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 MAGEA5P43359 124 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 GSK3BP49841 420 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 ANXA11P50995 505 aaKnown RBP8.22□□□□□ -1.09
HMG20A-209ENST00000559728 CRISP3P54108 245 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 PPIAP62937 165 aaKnown RBP8.22□□□□□ -1.09
HMG20A-209ENST00000559728 RPP38P78345 283 aaKnown RBP8.22□□□□□ -1.09
HMG20A-209ENST00000559728 ZNF117Q03924 483 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 LIPEQ05469 1076 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 RBBP4Q09028 425 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 SKP2Q13309 424 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 SCARB2Q14108 478 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 FXNQ16595 210 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 ZNF630Q2M218 657 aaPredicted RBP8.22□□□□□ -1.09
HMG20A-209ENST00000559728 VMACQ2NL98 169 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 TMEM44Q2T9K0 475 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 GLIPR1L2Q4G1C9 344 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 VRK2Q86Y07 508 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 PLCZ1Q86YW0 608 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 PGAM4Q8N0Y7 254 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 CLIP4Q8N3C7 705 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 METTL25Q8N6Q8 603 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 GPR32P1Q8NGA4 272 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 CPT1CQ8TCG5 803 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 OIT3Q8WWZ8 545 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 CNOT9Q92600 299 aaKnown RBP8.22□□□□□ -1.09
HMG20A-209ENST00000559728 PMM1Q92871 262 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 REXO5Q96IC2 774 aaKnown RBP8.22□□□□□ -1.09
HMG20A-209ENST00000559728 ZNF597Q96LX8 424 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 HOXD1Q9GZZ0 328 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 TSPAN10Q9H1Z9 355 aaPredicted RBP8.22□□□□□ -1.09
HMG20A-209ENST00000559728 MTHFD2LQ9H903 347 aaPredicted RBP8.22□□□□□ -1.09
HMG20A-209ENST00000559728 RLIMQ9NVW2 624 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 TAS2R1Q9NYW7 299 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 MED11Q9P086 117 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 CD300AQ9UGN4 299 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 PACSIN3Q9UKS6 424 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 CORO2BQ9UQ03 480 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 ZNF462Q96JM2 2506 aa8.22□□□□□ -1.09
HMG20A-209ENST00000559728 C15orf38-AP3S2A0A0A6YYH1 394 aa8.21□□□□□ -1.1
HMG20A-209ENST00000559728 A0A1B0GVC2 190 aa8.21□□□□□ -1.1
HMG20A-209ENST00000559728 CDHR4A6H8M9 788 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms