RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 A0A1W2PQD3 144 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 A0A1W2PRB8 838 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 TNFSF11O14788 317 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 CXCL13O43927 109 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 GLRA3O75311 464 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 KCNK2O95069 426 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 SYNGR4O95473 234 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 PROCP04070 461 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 TUBBP07437 444 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 UROSP10746 265 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 MYL2P10916 166 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 ACP2P11117 423 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 ME2P23368 584 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 LCN1P31025 176 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 ZNF41P51814 821 aaPredicted RBP11.69□□□□□ -0.54
TPM1-220ENST00000559556 ATP5J2P56134 94 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 DNAJB13P59910 316 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 ZNF844Q08AG5 666 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 ZNF385BQ569K4 471 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 CPTPQ5TA50 214 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 HBMQ6B0K9 141 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 ZAR1Q86SH2 424 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 WFDC8Q8IUA0 241 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 MISPQ8IVT2 679 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 MNS1Q8NEH6 495 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 OR6Y1Q8NGX8 325 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 CEP70Q8NHQ1 597 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 ZFP28Q8NHY6 868 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 CIDECQ96AQ7 238 aaPredicted RBP11.69□□□□□ -0.54
TPM1-220ENST00000559556 ZBED6CLQ96FA7 236 aaPredicted RBP11.69□□□□□ -0.54
TPM1-220ENST00000559556 CCT7Q99832 543 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 MED17Q9NVC6 651 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 GPR52Q9Y2T5 361 aa11.69□□□□□ -0.54
TPM1-220ENST00000559556 A0A0J9YW62 118 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 SEC22BO75396 215 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 CRCPO75575 148 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 GCM2O75603 506 aaPredicted RBP11.68□□□□□ -0.54
TPM1-220ENST00000559556 ELK4P28324 431 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 GPC1P35052 558 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 PDE7AQ13946 482 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 ZNF239Q16600 458 aaKnown RBP11.68□□□□□ -0.54
TPM1-220ENST00000559556 DUSP5Q16690 384 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 EXOSC6Q5RKV6 272 aaKnown RBP11.68□□□□□ -0.54
TPM1-220ENST00000559556 ANKRD26P1Q6NSI1 321 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 MFSD12Q6NUT3 480 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 ADAM5Q6NVV9 412 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 CXXC5Q7LFL8 322 aaKnown RBP11.68□□□□□ -0.54
TPM1-220ENST00000559556 TRABD2AQ86V40 505 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 GATSQ8NAP1 163 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 SLC16A11Q8NCK7 471 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 NUP43Q8NFH3 380 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 POC1BQ8TC44 478 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 RNF128Q8TEB7 428 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 KLHL15Q96M94 604 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 KLHDC3Q9BQ90 382 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 IQCGQ9H095 443 aaKnown RBP11.68□□□□□ -0.54
TPM1-220ENST00000559556 TMEM185BQ9H7F4 350 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 UBQLN4Q9NRR5 601 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 ACSS1Q9NUB1 689 aaPredicted RBP11.68□□□□□ -0.54
TPM1-220ENST00000559556 C1orf109Q9NX04 203 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 PTGDR2Q9Y5Y4 395 aa11.68□□□□□ -0.54
TPM1-220ENST00000559556 OVOL3O00110 214 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 HSPA4LO95757 839 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 OPN1LWP04000 364 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 LINGO3P0C6S8 592 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 SDC1P18827 310 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 TNK1Q13470 666 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 ETFDHQ16134 617 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 CFAP157Q5JU67 520 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 PDSS1Q5T2R2 415 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 CLEC6AQ6EIG7 209 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 GTF2IRD2BQ6EKJ0 949 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 ZCCHC12Q6PEW1 402 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 FIGNL1Q6PIW4 674 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 TFAP2EQ6VUC0 442 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 RNF165Q6ZSG1 346 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 SZRD1Q7Z422 152 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 GTF2IRD2Q86UP8 949 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 GABRG1Q8N1C3 465 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 LRRN4CLQ8ND94 238 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 STEAP2Q8NFT2 490 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 FBXO30Q8TB52 745 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 RAB3IL1Q8TBN0 382 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 AKAP1Q92667 903 aaKnown RBP eCLIP11.67□□□□□ -0.54
TPM1-220ENST00000559556 S100PBPQ96BU1 408 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 SH3YL1Q96HL8 342 aaPredicted RBP11.67□□□□□ -0.54
TPM1-220ENST00000559556 TXLNGYQ9BZA5 131 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 REEP4Q9H6H4 257 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 C12orf49Q9H741 205 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 LRTM1Q9HBL6 345 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 GP6Q9HCN6 339 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 FBXO34Q9NWN3 711 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 TBK1Q9UHD2 729 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 RNF115Q9Y4L5 304 aa11.67□□□□□ -0.54
TPM1-220ENST00000559556 A0A1W2PPM1 405 aa11.66□□□□□ -0.54
TPM1-220ENST00000559556 SLC28A1O00337 649 aa11.66□□□□□ -0.54
TPM1-220ENST00000559556 SCDO00767 359 aa11.66□□□□□ -0.54
TPM1-220ENST00000559556 PLIN3O60664 434 aa11.66□□□□□ -0.54
TPM1-220ENST00000559556 PABPC4LP0CB38 370 aaKnown RBP11.66□□□□□ -0.54
TPM1-220ENST00000559556 NEFHP12036 1026 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms