RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 POC1BQ8TC44 478 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 C12orf49Q9H741 205 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 ZCCHC3Q9NUD5 404 aaKnown RBP18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 MED17Q9NVC6 651 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 BEX4Q9NWD9 120 aaPredicted RBP18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 ELOVL5Q9NYP7 299 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 NTMQ9P121 344 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 KCNE3Q9Y6H6 103 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 TBX19O60806 448 aa18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 SKAP2O75563 359 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 CD8BP10966 210 aa18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 CREB1P16220 341 aa18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 SFTPDP35247 375 aa18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 PRIM2P49643 509 aa18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 ZNF41P51814 821 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 POU6F2P78424 691 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 PTGR1Q14914 329 aa18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 NDUFAF6Q330K2 333 aa18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 ALKBH2Q6NS38 261 aa18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 TRABD2AQ86V40 505 aa18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 WDR75Q8IWA0 830 aaKnown RBP18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 CIARTQ8N365 385 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 ROBO4Q8WZ75 1007 aa18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 ADGRG7Q96K78 797 aa18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 ACSS1Q9NUB1 689 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 MID2Q9UJV3 735 aa18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 NSD1Q96L73 2696 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-206ENST00000559373 TTC36A6NLP5 189 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 SCDO00767 359 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 SCAMP2O15127 329 aaKnown RBP18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 THBDP07204 575 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 IFI6P09912 130 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 PSMA4P25789 261 aaKnown RBP18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 ADSLP30566 484 aaPredicted RBP18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 CTBP2P56545 445 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 TP53BP2Q13625 1128 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 Q5PR19 223 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 LRIG3Q6UXM1 1119 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 P3H2Q8IVL5 708 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 GTPBP8Q8N3Z3 284 aaPredicted RBP18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 KRTCAP2Q8N6L1 136 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 EIF1ADQ8N9N8 165 aaKnown RBP18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 ATP6V1C2Q8NEY4 427 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 OR6Y1Q8NGX8 325 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 PHOSPHO1Q8TCT1 267 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 TCP10LQ8TDR4 215 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 ZBTB9Q96C00 473 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 ARSGQ96EG1 525 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 PERPQ96FX8 193 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 ZNF764Q96H86 408 aaPredicted RBP18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 C18orf12Q96KH6 178 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 MARK4Q96L34 752 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 TRMOQ9BU70 441 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 ZNF395Q9H8N7 513 aaPredicted RBP18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 ANKZF1Q9H8Y5 726 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 PPCSQ9HAB8 311 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 UBQLN4Q9NRR5 601 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 ZDHHC2Q9UIJ5 367 aa18.35■□□□□ 0.53
TSPAN3-206ENST00000559373 TLN2Q9Y4G6 2542 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 NPHS1O60500 1241 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 SMPD2O60906 423 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 C6orf47O95873 294 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 PLAUP00749 431 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 FGF4P08620 206 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 INHBBP09529 407 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 FOSL1P15407 271 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 ZNF17P17021 662 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 LOXP28300 417 aaPredicted RBP18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 HPCAL1P37235 193 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 ASMTP46597 345 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 LTBQ06643 244 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 ACKR1Q16570 336 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 CPTPQ5TA50 214 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 HBMQ6B0K9 141 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 CDC73Q6P1J9 531 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 CBLN3Q6UW01 205 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 RNF165Q6ZSG1 346 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 OR5AK3PQ8NH89 298 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 B4GALNT2Q8NHY0 566 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 CCL19Q99731 98 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 BTBD2Q9BX70 525 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 CXorf36Q9H7Y0 433 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 ATP6V1HQ9UI12 483 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 MCTS1Q9ULC4 181 aaKnown RBP18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 TMED5Q9Y3A6 229 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 EMC9Q9Y3B6 208 aa18.34■□□□□ 0.53
TSPAN3-206ENST00000559373 ABCA2Q9BZC7 2435 aa18.33■□□□□ 0.53
TSPAN3-206ENST00000559373 CADP27708 2225 aa18.33■□□□□ 0.53
TSPAN3-206ENST00000559373 A0A087WZY1 265 aa18.33■□□□□ 0.52
TSPAN3-206ENST00000559373 EFNA2O43921 213 aa18.33■□□□□ 0.52
TSPAN3-206ENST00000559373 SYNGR4O95473 234 aa18.33■□□□□ 0.52
TSPAN3-206ENST00000559373 NUDT14O95848 222 aa18.33■□□□□ 0.52
TSPAN3-206ENST00000559373 FCGR2AP12318 317 aa18.33■□□□□ 0.52
TSPAN3-206ENST00000559373 CCT3P49368 545 aaKnown RBP18.33■□□□□ 0.52
TSPAN3-206ENST00000559373 ZNF117Q03924 483 aa18.33■□□□□ 0.52
TSPAN3-206ENST00000559373 FOXF1Q12946 379 aa18.33■□□□□ 0.52
TSPAN3-206ENST00000559373 TSC22D1Q15714 1073 aa18.33■□□□□ 0.52
TSPAN3-206ENST00000559373 TOMM34Q15785 309 aaPredicted RBP18.33■□□□□ 0.52
TSPAN3-206ENST00000559373 EXOSC6Q5RKV6 272 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms