RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 SDHAF3Q9NRP4 125 aa16.96■□□□□ 0.31
CASC4-209ENST00000559222 EXD2Q9NVH0 621 aa16.96■□□□□ 0.31
CASC4-209ENST00000559222 VAPAQ9P0L0 249 aa16.96■□□□□ 0.31
CASC4-209ENST00000559222 PCDHGB3Q9Y5G1 929 aa16.96■□□□□ 0.31
CASC4-209ENST00000559222 A0A1W2PQD3 144 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 STX11O75558 287 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 UGT2B17O75795 530 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 H6PDO95479 791 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 ESRRAP11474 423 aaPredicted RBP16.95■□□□□ 0.3
CASC4-209ENST00000559222 CLK3P49761 638 aaKnown RBP16.95■□□□□ 0.3
CASC4-209ENST00000559222 DSCR4P56555 118 aaPredicted RBP16.95■□□□□ 0.3
CASC4-209ENST00000559222 NUP107P57740 925 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 CHRNEQ04844 493 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 C17orf67Q0P5P2 114 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 GPAT3Q53EU6 434 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 NHSL2Q5HYW2 709 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 WLSQ5T9L3 541 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 IFNEQ86WN2 208 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 ULK2Q8IYT8 1036 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 PHOSPHO1Q8TCT1 267 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 ABTB1Q969K4 478 aaPredicted RBP16.95■□□□□ 0.3
CASC4-209ENST00000559222 WDYHV1Q96HA8 205 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 SLC38A1Q9H2H9 487 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 TP63Q9H3D4 680 aaPredicted RBP16.95■□□□□ 0.3
CASC4-209ENST00000559222 SAR1AQ9NR31 198 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 ALKBH4Q9NXW9 302 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 KLHL14Q9P2G3 628 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 TRIM33Q9UPN9 1127 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 VDAC3Q9Y277 283 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 CARD8Q9Y2G2 431 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 WDR45Q9Y484 360 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 PCNX1Q96RV3 2341 aa16.95■□□□□ 0.3
CASC4-209ENST00000559222 ICE1Q9Y2F5 2266 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 A0A1W2PP18 115 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 CLDN24A6NM45 220 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 E9PLN8 166 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 KRT75O95678 551 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 AK1P00568 194 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 HPGDP15428 266 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 ACVR2AP27037 513 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 CRATP43155 626 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 ZNF141Q15928 474 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 RPS26P11Q5JNZ5 115 aaPredicted RBP16.94■□□□□ 0.3
CASC4-209ENST00000559222 ATAD3BQ5T9A4 648 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 DLEU7Q6UYE1 221 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 SEM1Q6ZVN7 128 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 SFXN2Q96NB2 322 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 VKORC1Q9BQB6 163 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 NMUR2Q9GZQ4 415 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 PRDM14Q9GZV8 571 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 SAP130Q9H0E3 1048 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 CAMK2AQ9UQM7 478 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 L3MBTL1Q9Y468 752 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 DTNAQ9Y4J8 743 aa16.94■□□□□ 0.3
CASC4-209ENST00000559222 H0YC42 278 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 CLIC1O00299 241 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 FBP2O00757 339 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 HCRTR2O43614 444 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 LHX2P50458 406 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 TPD52P55327 224 aaPredicted RBP16.93■□□□□ 0.3
CASC4-209ENST00000559222 PER3P56645 1201 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 KLF10Q13118 480 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 SELPLGQ14242 412 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 TOMM34Q15785 309 aaPredicted RBP16.93■□□□□ 0.3
CASC4-209ENST00000559222 C1orf185Q5T7R7 199 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 RAET1LQ5VY80 246 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 METTL21CQ5VZV1 264 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 RPTNQ6XPR3 784 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 ZNF619Q8N2I2 560 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 POC1BQ8TC44 478 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 RABEP2Q9H5N1 569 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 SUCOQ9UBS9 1254 aaKnown RBP16.93■□□□□ 0.3
CASC4-209ENST00000559222 PTPN13Q12923 2485 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 DOPEY1Q5JWR5 2465 aa16.93■□□□□ 0.3
CASC4-209ENST00000559222 OR2M5A3KFT3 312 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 SERINC4A6NH21 518 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 SOX30O94993 753 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 AGR2O95994 175 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 BCHEP06276 602 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 GLI4P10075 376 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 DRD4P21917 467 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 ADH7P40394 386 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 CLDN18P56856 261 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 DSTNP60981 165 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 IRX1P78414 480 aaPredicted RBP16.92■□□□□ 0.3
CASC4-209ENST00000559222 SRYQ05066 204 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 RGNQ15493 299 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 TMEM44Q2T9K0 475 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 PLPPR5Q32ZL2 321 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 ACSF3Q4G176 576 aaPredicted RBP16.92■□□□□ 0.3
CASC4-209ENST00000559222 MRGPRGQ86SM5 289 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 ZNF527Q8NB42 609 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 B4GALNT2Q8NHY0 566 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 MAL2Q969L2 176 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 TRNT1Q96Q11 434 aaKnown RBP16.92■□□□□ 0.3
CASC4-209ENST00000559222 CPPED1Q9BRF8 314 aaPredicted RBP16.92■□□□□ 0.3
CASC4-209ENST00000559222 HOXD1Q9GZZ0 328 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 FAM107BQ9H098 131 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 MED17Q9NVC6 651 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 TMEM45AQ9NWC5 275 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms