RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 NDUFB5O43674 189 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 NPHS1O60500 1241 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 LYPLA1O75608 230 aaPredicted RBP12.13□□□□□ -0.47
VPS18-203ENST00000558855 C6orf47O95873 294 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 PLAUP00749 431 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 C1QCP02747 245 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 HMGN2P05204 90 aaKnown RBP12.13□□□□□ -0.47
VPS18-203ENST00000558855 NGFRP08138 427 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 NUDT17P0C025 328 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 LINGO3P0C6S8 592 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 CD8BP10966 210 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 POU2F1P14859 743 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 ZNF117Q03924 483 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 FOXF1Q12946 379 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 EXOC3L2Q2M3D2 409 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 GLYR1Q49A26 553 aaPredicted RBP12.13□□□□□ -0.47
VPS18-203ENST00000558855 C6orf136Q5SQH8 315 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 OR2A2Q6IF42 318 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 PPP4R4Q6NUP7 873 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 CHMP1BQ7LBR1 199 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 CLEC4FQ8N1N0 589 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 GTPBP8Q8N3Z3 284 aaPredicted RBP12.13□□□□□ -0.47
VPS18-203ENST00000558855 OR5AK3PQ8NH89 298 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 ZFP28Q8NHY6 868 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 PPP1R14CQ8TAE6 165 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 JADE3Q92613 823 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 PKNOX2Q96KN3 472 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 TRMOQ9BU70 441 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 SRXN1Q9BYN0 137 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 PPCSQ9HAB8 311 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 GPATCH2Q9NW75 528 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 AP4B1Q9Y6B7 739 aa12.13□□□□□ -0.47
VPS18-203ENST00000558855 ITM2AO43736 263 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 SLU7O95391 586 aaKnown RBP12.12□□□□□ -0.47
VPS18-203ENST00000558855 ALOX5P09917 674 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 ZNF17P17021 662 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 ETV4P43268 484 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 PSMD4P55036 377 aaKnown RBP12.12□□□□□ -0.47
VPS18-203ENST00000558855 RPS26P62854 115 aaKnown RBP12.12□□□□□ -0.47
VPS18-203ENST00000558855 ZNF844Q08AG5 666 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 STAC2Q6ZMT1 411 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 FAM214BQ7L5A3 538 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 RIMKLAQ8IXN7 391 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 COX18Q8N8Q8 333 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 CEP70Q8NHQ1 597 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 AENQ8WTP8 325 aaKnown RBP12.12□□□□□ -0.47
VPS18-203ENST00000558855 ROBO4Q8WZ75 1007 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 MED18Q9BUE0 208 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 C20orf27Q9GZN8 174 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 UBTD1Q9HAC8 227 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 C3orf14Q9HBI5 128 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 KCNE5Q9UJ90 142 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 MRTO4Q9UKD2 239 aaKnown RBP12.12□□□□□ -0.47
VPS18-203ENST00000558855 PROCRQ9UNN8 238 aa12.12□□□□□ -0.47
VPS18-203ENST00000558855 FN1P02751 2386 aaKnown RBP12.11□□□□□ -0.47
VPS18-203ENST00000558855 ARID1AO14497 2285 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 C7orf72A4D263 438 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 TTC36A6NLP5 189 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 NPIPB9F8W1W9 429 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 KLF4O43474 513 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 TYROBPO43914 113 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 SS18L1O75177 396 aaPredicted RBP12.11□□□□□ -0.47
VPS18-203ENST00000558855 GOSR1O95249 250 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 EDNRAP25101 427 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 CLK3P49761 638 aaKnown RBP12.11□□□□□ -0.47
VPS18-203ENST00000558855 POU6F2P78424 691 aaPredicted RBP12.11□□□□□ -0.47
VPS18-203ENST00000558855 NKX6-1P78426 367 aaPredicted RBP12.11□□□□□ -0.47
VPS18-203ENST00000558855 MLC1Q15049 377 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 TSC22D1Q15714 1073 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 SGCBQ16585 318 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 IL23RQ5VWK5 629 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 CDC73Q6P1J9 531 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 ATG4DQ86TL0 474 aaPredicted RBP12.11□□□□□ -0.47
VPS18-203ENST00000558855 CLECL1Q8IZS7 167 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 OR5D16Q8NGK9 328 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 OR2V1Q8NHB1 315 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 PSMA8Q8TAA3 256 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 IGFBPL1Q8WX77 278 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 MTERF3Q96E29 417 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 BTBD2Q9BX70 525 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 KLHL4Q9C0H6 718 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 PIGUQ9H490 435 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 COQ10BQ9H8M1 238 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 NEUROD4Q9HD90 331 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 NDRG3Q9UGV2 375 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.11□□□□□ -0.47
VPS18-203ENST00000558855 MID2Q9UJV3 735 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 ICAM5Q9UMF0 924 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 TMED5Q9Y3A6 229 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 SNX8Q9Y5X2 465 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 V9GYY5 206 aaPredicted RBP12.11□□□□□ -0.47
VPS18-203ENST00000558855 ROS1P08922 2347 aa12.11□□□□□ -0.47
VPS18-203ENST00000558855 NAV3Q8IVL0 2385 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.1□□□□□ -0.47
VPS18-203ENST00000558855 A0A1W2PQD3 144 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 ESPNB1AK53 854 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 C16orf97H3BN30 126 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 LINC01387J3KSC0 135 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 ADAMDEC1O15204 470 aa12.1□□□□□ -0.47
VPS18-203ENST00000558855 BCAS1O75363 584 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms