RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 VKORC1Q9BQB6 163 aa11.22□□□□□ -0.61
SMAD3-205ENST00000558428 UGT2B28Q9BY64 529 aa11.22□□□□□ -0.61
SMAD3-205ENST00000558428 FAM107BQ9H098 131 aa11.22□□□□□ -0.61
SMAD3-205ENST00000558428 RAD21L1Q9H4I0 556 aa11.22□□□□□ -0.61
SMAD3-205ENST00000558428 SAR1AQ9NR31 198 aa11.22□□□□□ -0.61
SMAD3-205ENST00000558428 POLE3Q9NRF9 147 aa11.22□□□□□ -0.61
SMAD3-205ENST00000558428 ALKBH4Q9NXW9 302 aa11.22□□□□□ -0.61
SMAD3-205ENST00000558428 SLC25A37Q9NYZ2 338 aa11.22□□□□□ -0.61
SMAD3-205ENST00000558428 SLAMF8Q9P0V8 285 aa11.22□□□□□ -0.61
SMAD3-205ENST00000558428 LIPT1Q9Y234 373 aa11.22□□□□□ -0.61
SMAD3-205ENST00000558428 NDUFAF1Q9Y375 327 aa11.22□□□□□ -0.61
SMAD3-205ENST00000558428 MRPS18CQ9Y3D5 142 aaKnown RBP11.22□□□□□ -0.61
SMAD3-205ENST00000558428 DTNAQ9Y4J8 743 aa11.22□□□□□ -0.61
SMAD3-205ENST00000558428 PTPN13Q12923 2485 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 CENPVL1A0A0U1RR11 272 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 GTPBP1O00178 669 aaKnown RBP11.21□□□□□ -0.61
SMAD3-205ENST00000558428 HCRTR2O43614 444 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 KIAA0513O60268 411 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 ZIC3O60481 467 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 ZG16O60844 167 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 TNFRSF21O75509 655 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 ACTL6AO96019 429 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 GUSBP08236 651 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 MSX1P28360 303 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 LSP1P33241 339 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 GNGT1P63211 74 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 CHRNEQ04844 493 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 KLF10Q13118 480 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 RGNQ15493 299 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 ZNF141Q15928 474 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 DCST1Q5T197 706 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 RAET1LQ5VY80 246 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 VASNQ6EMK4 673 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 AAGABQ6PD74 315 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 ENPP6Q6UWR7 440 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 NCCRP1Q6ZVX7 275 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-205ENST00000558428 SPATA21Q7Z572 469 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 DHDDSQ86SQ9 333 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 MSRB3Q8IXL7 192 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 ZNF619Q8N2I2 560 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 ANKFN1Q8N957 763 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 B4GALNT2Q8NHY0 566 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 TRNT1Q96Q11 434 aaKnown RBP11.21□□□□□ -0.61
SMAD3-205ENST00000558428 TIMP4Q99727 224 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 ELAC2Q9BQ52 826 aaKnown RBP11.21□□□□□ -0.61
SMAD3-205ENST00000558428 SAP130Q9H0E3 1048 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 NSRP1Q9H0G5 558 aaKnown RBP11.21□□□□□ -0.61
SMAD3-205ENST00000558428 VAPAQ9P0L0 249 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 P2RX2Q9UBL9 471 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-205ENST00000558428 KCNE5Q9UJ90 142 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 CAMK2AQ9UQM7 478 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 VDAC3Q9Y277 283 aa11.21□□□□□ -0.61
SMAD3-205ENST00000558428 CACNA1CQ13936 2221 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 USP9YO00507 2555 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-205ENST00000558428 TMEM247A6NEH6 219 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 WIPF3A6NGB9 483 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 SERINC4A6NH21 518 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 WDR1O75083 606 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 UGT2B17O75795 530 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 BCHEP06276 602 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 CHRM4P08173 479 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 UBL4AP11441 157 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 GABRA1P14867 456 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 PPIBP23284 216 aaKnown RBP11.2□□□□□ -0.62
SMAD3-205ENST00000558428 ACVR2AP27037 513 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 ZNF41P51814 821 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-205ENST00000558428 GFRA1P56159 465 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 ZNF117Q03924 483 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 FADDQ13158 208 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 NFYCQ13952 458 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 NDUFAF6Q330K2 333 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 ARSKQ6UWY0 536 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 LRRC74BQ6ZQY2 392 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 CPLX4Q7Z7G2 160 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 HMGN2P46Q86SG4 172 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 RETREG3Q86VR2 466 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 PM20D2Q8IYS1 436 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 ULK2Q8IYT8 1036 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 TMCO5AQ8N6Q1 288 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 OR5M1Q8NGP8 315 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 DMRTA2Q96SC8 542 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 SLC38A1Q9H2H9 487 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 THUMPD1Q9NXG2 353 aaKnown RBP11.2□□□□□ -0.62
SMAD3-205ENST00000558428 CALML5Q9NZT1 146 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 CARD8Q9Y2G2 431 aa11.2□□□□□ -0.62
SMAD3-205ENST00000558428 TRBV5-3A0A0A0MS03 114 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 GMNCA6NCL1 334 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 EVPLLA8MZ36 301 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 AHRRA9YTQ3 701 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 SHISA8B8ZZ34 492 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 FAM47E-STBD1D6RA91 191 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 ZNF264O43296 627 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 OIP5O43482 229 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 EIF4E2O60573 245 aaKnown RBP11.19□□□□□ -0.62
SMAD3-205ENST00000558428 CYP7B1O75881 506 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 NUDT14O95848 222 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 CSTAP01040 98 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 NUDT7P0C024 238 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 DRD4P21917 467 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms