RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 FBXL2Q9UKC9 423 aa7.7□□□□□ -1.18
TPM1-213ENST00000558400 PRDM4Q9UKN5 801 aa7.7□□□□□ -1.18
TPM1-213ENST00000558400 CAMK2AQ9UQM7 478 aa7.7□□□□□ -1.18
TPM1-213ENST00000558400 LIPT1Q9Y234 373 aa7.7□□□□□ -1.18
TPM1-213ENST00000558400 NUP214P35658 2090 aaPredicted RBP7.7□□□□□ -1.18
TPM1-213ENST00000558400 NAV3Q8IVL0 2385 aa7.7□□□□□ -1.18
TPM1-213ENST00000558400 CELSR2Q9HCU4 2923 aa7.7□□□□□ -1.18
TPM1-213ENST00000558400 UQCRHLA0A096LP55 91 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 FAM234BA2RU67 622 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 GTPBP1O00178 669 aaKnown RBP7.69□□□□□ -1.18
TPM1-213ENST00000558400 HNRNPRO43390 633 aaKnown RBP7.69□□□□□ -1.18
TPM1-213ENST00000558400 ANP32DO95626 131 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 GRNP28799 593 aaKnown RBP7.69□□□□□ -1.18
TPM1-213ENST00000558400 IL12AP29459 219 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 EIF1P41567 113 aaKnown RBP7.69□□□□□ -1.18
TPM1-213ENST00000558400 DGKQP52824 942 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 AQP5P55064 265 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 STX5Q13190 355 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 FLYWCH1Q4VC44 716 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 METTL21CQ5VZV1 264 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 NSUN5P2Q63ZY6 315 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 SAXO2Q658L1 398 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 RTL6Q6ICC9 239 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 HEPHL1Q6MZM0 1159 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 APOOLQ6UXV4 268 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 C16orf62Q7Z3J2 963 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 MAVSQ7Z434 540 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 MEIOBQ8N635 442 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 OR5AK3PQ8NH89 298 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 FBXO30Q8TB52 745 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 PHOSPHO1Q8TCT1 267 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 C1GALT1C1Q96EU7 318 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 LRRC46Q96FV0 321 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 ITCHQ96J02 903 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 ZFP3Q96NJ6 502 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 OR52B2Q96RD2 323 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 TM9SF2Q99805 663 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 SLC35A5Q9BS91 424 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 OR51I1Q9H343 314 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 MED4Q9NPJ6 270 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 FBXO34Q9NWN3 711 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 TNFRSF10DQ9UBN6 386 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 ZNF629Q9UEG4 869 aaPredicted RBP7.69□□□□□ -1.18
TPM1-213ENST00000558400 TRIM33Q9UPN9 1127 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 RNF6Q9Y252 685 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 DTNAQ9Y4J8 743 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 AP4B1Q9Y6B7 739 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 OTOGQ6ZRI0 2925 aa7.69□□□□□ -1.18
TPM1-213ENST00000558400 DVL2O14641 736 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 HCRTR2O43614 444 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 EIF4E2O60573 245 aaKnown RBP7.68□□□□□ -1.18
TPM1-213ENST00000558400 IL18BPO95998 194 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 OR12D1P0DN82 309 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 COL8A1P27658 744 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 ADH6P28332 368 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 CEACAM8P31997 349 aaPredicted RBP7.68□□□□□ -1.18
TPM1-213ENST00000558400 ADH7P40394 386 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 PEX19P40855 299 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 KHKP50053 298 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 LHX2P50458 406 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 ATP4BP51164 291 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 P2RX1P51575 399 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 ZNF41P51814 821 aaPredicted RBP7.68□□□□□ -1.18
TPM1-213ENST00000558400 SUMO3P55854 103 aaPredicted RBP7.68□□□□□ -1.18
TPM1-213ENST00000558400 RPS3AP61247 264 aaKnown RBP7.68□□□□□ -1.18
TPM1-213ENST00000558400 GNA13Q14344 377 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 ZNF141Q15928 474 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 SLC25A35Q3KQZ1 300 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 ACSF3Q4G176 576 aaPredicted RBP7.68□□□□□ -1.18
TPM1-213ENST00000558400 CCNJQ5T5M9 372 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 RAET1LQ5VY80 246 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 MARVELD2Q8N4S9 558 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 TOR1AIP2Q8NFQ8 470 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 B4GALNT2Q8NHY0 566 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 ZBTB8AQ96BR9 441 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 TRNT1Q96Q11 434 aaKnown RBP7.68□□□□□ -1.18
TPM1-213ENST00000558400 SPOCK3Q9BQ16 436 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 RTN4RQ9BZR6 473 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 ZNF350Q9GZX5 532 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 SAP130Q9H0E3 1048 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 RAD21L1Q9H4I0 556 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 MTHFD2LQ9H903 347 aaPredicted RBP7.68□□□□□ -1.18
TPM1-213ENST00000558400 PAQR5Q9NXK6 330 aaPredicted RBP7.68□□□□□ -1.18
TPM1-213ENST00000558400 CALML5Q9NZT1 146 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 FLRT3Q9NZU0 649 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 RPH3AQ9Y2J0 694 aaPredicted RBP7.68□□□□□ -1.18
TPM1-213ENST00000558400 FAM215AQ9Y5M1 114 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 KCNE3Q9Y6H6 103 aa7.68□□□□□ -1.18
TPM1-213ENST00000558400 A0A0G2JNJ9 132 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 OR2M5A3KFT3 312 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 C7orf72A4D263 438 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 MBD3L4A6NDZ8 208 aaPredicted RBP7.67□□□□□ -1.18
TPM1-213ENST00000558400 MBD3L3A6NE82 208 aaPredicted RBP7.67□□□□□ -1.18
TPM1-213ENST00000558400 TMEM247A6NEH6 219 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 SERINC4A6NH21 518 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 MBD3L5A6NJ08 208 aaPredicted RBP7.67□□□□□ -1.18
TPM1-213ENST00000558400 NPIPB9F8W1W9 429 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 H0Y3Z8 333 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 ZNF264O43296 627 aa7.67□□□□□ -1.18
TPM1-213ENST00000558400 FCMRO60667 390 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms