RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 GAGE2AQ6NT46 116 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 TMEM26Q6ZUK4 368 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 INTS8Q75QN2 995 aaKnown RBP5.05□□□□□ -1.6
RTF1-204ENST00000558117 GUF1Q8N442 669 aaKnown RBP5.05□□□□□ -1.6
RTF1-204ENST00000558117 TC2NQ8N9U0 490 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 FAM57AQ8TBR7 257 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 FCAMRQ8WWV6 532 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 ZNF606Q8WXB4 792 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 ISG20Q96AZ6 181 aaKnown RBP5.05□□□□□ -1.6
RTF1-204ENST00000558117 ZNF524Q96C55 264 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 ZBED6CLQ96FA7 236 aaPredicted RBP5.05□□□□□ -1.6
RTF1-204ENST00000558117 LINC00615Q96LM1 132 aaPredicted RBP5.05□□□□□ -1.6
RTF1-204ENST00000558117 SERPINB11Q96P15 392 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 ACCSQ96QU6 501 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 OR2M4Q96R27 311 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 RAB33BQ9H082 229 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 GAGE2DQ9UEU5 116 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 EXOC7Q9UPT5 735 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 CR1P17927 2039 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 CADP27708 2225 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 A0A1W2PRV1 198 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 PMS2P5A8MQ11 134 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 RASGRF2O14827 1237 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 TO15178 435 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 AVILO75366 819 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 LCA5LO95447 670 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 POP4O95707 220 aaKnown RBP5.04□□□□□ -1.6
RTF1-204ENST00000558117 WDPCPO95876 746 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 MMP11P24347 488 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 PTPN3P26045 913 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 GJB2P29033 226 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 MMP12P39900 470 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 BMXP51813 675 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 ARF5P84085 180 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 KLHL30Q0D2K2 578 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 ZNF273Q14593 569 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 KBTBD12Q3ZCT8 623 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 PYCR3Q53H96 274 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 CEP85LQ5SZL2 805 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 SLC35E4Q6ICL7 350 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 IRGCQ6NXR0 463 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 TAC4Q86UU9 113 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 TBC1D21Q8IYX1 336 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 SYCP3Q8IZU3 236 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 RYBPQ8N488 228 aaPredicted RBP5.04□□□□□ -1.6
RTF1-204ENST00000558117 ZNF473Q8WTR7 871 aaKnown RBP5.04□□□□□ -1.6
RTF1-204ENST00000558117 RPRD1AQ96P16 312 aaPredicted RBP5.04□□□□□ -1.6
RTF1-204ENST00000558117 PSD2Q9BQI7 771 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 SHARPINQ9H0F6 387 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 CUEDC2Q9H467 287 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 APOBEC3GQ9HC16 384 aaKnown RBP5.04□□□□□ -1.6
RTF1-204ENST00000558117 PHPT1Q9NRX4 125 aaPredicted RBP5.04□□□□□ -1.6
RTF1-204ENST00000558117 PSD3Q9NYI0 1048 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 NPAP1Q9NZP6 1156 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 CRNNQ9UBG3 495 aaPredicted RBP5.04□□□□□ -1.6
RTF1-204ENST00000558117 MRPS2Q9Y399 296 aaKnown RBP5.04□□□□□ -1.6
RTF1-204ENST00000558117 LIPGQ9Y5X9 500 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 IKBKGQ9Y6K9 419 aa5.04□□□□□ -1.6
RTF1-204ENST00000558117 TMEM89A2RUT3 159 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 SLC9B1P1A6NJY1 282 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 CCDC188H7C350 402 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 XPO1O14980 1071 aaKnown RBP5.03□□□□□ -1.6
RTF1-204ENST00000558117 CIDEAO60543 219 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 GSRP00390 522 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 APOEP02649 317 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 RHOCP08134 193 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 IL10P22301 178 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 ZFP36L2P47974 494 aaKnown RBP5.03□□□□□ -1.6
RTF1-204ENST00000558117 CAPZA1P52907 286 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 CRIP2P52943 208 aaPredicted RBP5.03□□□□□ -1.6
RTF1-204ENST00000558117 CDH4P55283 916 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
RTF1-204ENST00000558117 SNRPEP62304 92 aaKnown RBP5.03□□□□□ -1.6
RTF1-204ENST00000558117 HTD2P86397 168 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 CDK3Q00526 305 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 RALGDSQ12967 914 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 EIF4EBP2Q13542 120 aaPredicted RBP5.03□□□□□ -1.6
RTF1-204ENST00000558117 RCN2Q14257 317 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 KRT33BQ14525 404 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 UGP2Q16851 508 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 SLC25A35Q3KQZ1 300 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 ANKRD20A4Q4UJ75 823 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 ANKRD20A8PQ5CZ79 823 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 IGSF11Q5DX21 431 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 TECRLQ5HYJ1 363 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 ANKRD20A2Q5SQ80 823 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 ANKRD20A1Q5TYW2 823 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 ANKRD20A3Q5VUR7 823 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 RUFY3Q7L099 469 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 STRADAQ7RTN6 431 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 SPATA19Q7Z5L4 167 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 CNTN4Q8IWV2 1026 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 PEX5LQ8IYB4 626 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 ARIH2OSQ8N7S6 290 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 STPG4Q8N801 248 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 NECAB1Q8N987 351 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 IPMKQ8NFU5 416 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 OR2AP1Q8NGE2 309 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 PTPMT1Q8WUK0 201 aaPredicted RBP5.03□□□□□ -1.6
RTF1-204ENST00000558117 FAM81BQ96LP2 452 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms