RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 GTPBP1O00178 669 aaKnown RBP9.73□□□□□ -0.85
XRCC3-216ENST00000556682 RNASET2O00584 256 aaKnown RBP9.73□□□□□ -0.85
XRCC3-216ENST00000556682 MSTNO14793 375 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 CASKO14936 926 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 NUDT14O95848 222 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 AK1P00568 194 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 MATN1P21941 496 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 SUCLG1P53597 346 aaKnown RBP9.73□□□□□ -0.85
XRCC3-216ENST00000556682 CLDN15P56746 228 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 RAC1P63000 192 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 HBA1P69905 142 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 BST1Q10588 318 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 PON3Q15166 354 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 DPY19L1Q2PZI1 675 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 DCST2Q5T1A1 773 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 CCNJQ5T5M9 372 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 ATG16L1Q676U5 607 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 OR4F3Q6IEY1 312 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 GTPBP8Q8N3Z3 284 aaPredicted RBP9.73□□□□□ -0.85
XRCC3-216ENST00000556682 METTL25Q8N6Q8 603 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 CNEP1R1Q8N9A8 125 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 GATSQ8NAP1 163 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 OR4A15Q8NGL6 344 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 B4GALNT2Q8NHY0 566 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 LINC01560Q8TB33 94 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 PHOSPHO1Q8TCT1 267 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 OTUB1Q96FW1 271 aaPredicted RBP9.73□□□□□ -0.85
XRCC3-216ENST00000556682 SH3YL1Q96HL8 342 aaPredicted RBP9.73□□□□□ -0.85
XRCC3-216ENST00000556682 SORT1Q99523 831 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 SLC39A3Q9BRY0 314 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 NUF2Q9BZD4 464 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 C20orf27Q9GZN8 174 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 RASSF1Q9NS23 344 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 MED17Q9NVC6 651 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 EXD2Q9NVH0 621 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 THAP1Q9NVV9 213 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 GPATCH2Q9NW75 528 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 FBXO34Q9NWN3 711 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 NKIRAS1Q9NYS0 192 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 HAO1Q9UJM8 370 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 HCFC1P51610 2035 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 APCP25054 2843 aa9.73□□□□□ -0.85
XRCC3-216ENST00000556682 ABCA12Q86UK0 2595 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 TMEM120BA0PK00 339 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 C7orf72A4D263 438 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 TRPC5OSA6NMA1 111 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 GJE1A6NN92 205 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 A8MXE2 369 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 SLCO1B7G3V0H7 640 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 EIF1AYO14602 144 aaKnown RBP9.72□□□□□ -0.85
XRCC3-216ENST00000556682 SMNDC1O75940 238 aaKnown RBP eCLIP9.72□□□□□ -0.85
XRCC3-216ENST00000556682 SYNGR4O95473 234 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 AGR2O95994 175 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 EIF1AXP47813 144 aaKnown RBP9.72□□□□□ -0.85
XRCC3-216ENST00000556682 PCYT1AP49585 367 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 SLC18A1P54219 525 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 ATP12AP54707 1039 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 SUMO3P55854 103 aaPredicted RBP9.72□□□□□ -0.85
XRCC3-216ENST00000556682 CLDN20P56880 219 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 MPP2Q14168 576 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 TMEM44Q2T9K0 475 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 PLPPR5Q32ZL2 321 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 ATAD3BQ5T9A4 648 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 GTF2IRD2BQ6EKJ0 949 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 PPP4R4Q6NUP7 873 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 PLXDC2Q6UX71 529 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 ESPNLQ6ZVH7 1005 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 C6orf120Q7Z4R8 191 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 ZAR1Q86SH2 424 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 GTF2IRD2Q86UP8 949 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 OR5AK3PQ8NH89 298 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 FNDC9Q8TBE3 224 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 FIG4Q92562 907 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 ARL8AQ96BM9 186 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 TESCQ96BS2 214 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 STARD4Q96DR4 205 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 REXO5Q96IC2 774 aaKnown RBP9.72□□□□□ -0.85
XRCC3-216ENST00000556682 ZNF845Q96IR2 970 aaPredicted RBP9.72□□□□□ -0.85
XRCC3-216ENST00000556682 DACH2Q96NX9 599 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 OR7D2Q96RA2 312 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 GPATCH1Q9BRR8 931 aaKnown RBP9.72□□□□□ -0.85
XRCC3-216ENST00000556682 RNF122Q9H9V4 155 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 MEAF6Q9HAF1 191 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 FANCFQ9NPI8 374 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 TIGARQ9NQ88 270 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 GALNT8Q9NY28 637 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 MCTS1Q9ULC4 181 aaKnown RBP9.72□□□□□ -0.85
XRCC3-216ENST00000556682 DTNAQ9Y4J8 743 aa9.72□□□□□ -0.85
XRCC3-216ENST00000556682 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.71□□□□□ -0.86
XRCC3-216ENST00000556682 RNF103-CHMP3A0A140T963 221 aa9.71□□□□□ -0.86
XRCC3-216ENST00000556682 FAM221AA4D161 298 aa9.71□□□□□ -0.86
XRCC3-216ENST00000556682 SHISA8B8ZZ34 492 aa9.71□□□□□ -0.86
XRCC3-216ENST00000556682 H0YC42 278 aa9.71□□□□□ -0.86
XRCC3-216ENST00000556682 ADAMDEC1O15204 470 aa9.71□□□□□ -0.86
XRCC3-216ENST00000556682 STX11O75558 287 aa9.71□□□□□ -0.86
XRCC3-216ENST00000556682 TNFSF13O75888 250 aa9.71□□□□□ -0.86
XRCC3-216ENST00000556682 CPSF4O95639 269 aaKnown RBP9.71□□□□□ -0.86
XRCC3-216ENST00000556682 PLGP00747 810 aaPredicted RBP9.71□□□□□ -0.86
XRCC3-216ENST00000556682 PABPC4LP0CB38 370 aaKnown RBP9.71□□□□□ -0.86
XRCC3-216ENST00000556682 CD1EP15812 388 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms