RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SEM1Q6ZVN7 128 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 CLEC4FQ8N1N0 589 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 ZNF527Q8NB42 609 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 CHDHQ8NE62 594 aaPredicted RBP10.45□□□□□ -0.74
SLIRP-205ENST00000556310 GOT1L1Q8NHS2 421 aaPredicted RBP10.45□□□□□ -0.74
SLIRP-205ENST00000556310 ZPLD1Q8TCW7 415 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 MIPOL1Q8TD10 442 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 NEURL3Q96EH8 262 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 MARK4Q96L34 752 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 HOXD1Q9GZZ0 328 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 ACBD3Q9H3P7 528 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 SDR39U1Q9NRG7 319 aaPredicted RBP10.45□□□□□ -0.74
SLIRP-205ENST00000556310 ZIM2Q9NZV7 527 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 Q9UFV3 132 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 RPH3AQ9Y2J0 694 aaPredicted RBP10.45□□□□□ -0.74
SLIRP-205ENST00000556310 KCNE3Q9Y6H6 103 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 CACNA1DQ01668 2161 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 DCHS2Q6V1P9 2916 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 MBD3L4A6NDZ8 208 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-205ENST00000556310 MBD3L3A6NE82 208 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-205ENST00000556310 MBD3L5A6NJ08 208 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-205ENST00000556310 HSPB2A8KAH6 182 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 NPIPB9F8W1W9 429 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 H0Y3Z8 333 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 LINC01387J3KSC0 135 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 UBDO15205 165 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 POLR3GO15318 223 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-205ENST00000556310 SLC22A3O75751 556 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 CPSF4O95639 269 aaKnown RBP10.44□□□□□ -0.74
SLIRP-205ENST00000556310 AGR2O95994 175 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 ZNF708P17019 499 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 MATN1P21941 496 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 TCEA1P23193 301 aaKnown RBP10.44□□□□□ -0.74
SLIRP-205ENST00000556310 MSX1P28360 303 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 CEACAM8P31997 349 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-205ENST00000556310 TIMP3P35625 211 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 KHKP50053 298 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 DGKQP52824 942 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 CLDN18P56856 261 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 CD226Q15762 336 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 HSPB2Q16082 182 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 BCL2A1Q16548 175 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 GLYR1Q49A26 553 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-205ENST00000556310 FLYWCH1Q4VC44 716 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 SAXO2Q658L1 398 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 MTERF4Q7Z6M4 381 aaKnown RBP10.44□□□□□ -0.74
SLIRP-205ENST00000556310 TRIML2Q8N7C3 387 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 GATSQ8NAP1 163 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 MBD3L2Q8NHZ7 208 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-205ENST00000556310 OR52E6Q96RD3 313 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 PANX1Q96RD7 426 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 SLC35A5Q9BS91 424 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 OR51I1Q9H343 314 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 CALHM2Q9HA72 323 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 TCF7L2Q9NQB0 619 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 EXD2Q9NVH0 621 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 APCP25054 2843 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 ANKHD1Q8IWZ3 2542 aaKnown RBP10.44□□□□□ -0.74
SLIRP-205ENST00000556310 LRBAP50851 2863 aa10.44□□□□□ -0.74
SLIRP-205ENST00000556310 MED12LQ86YW9 2145 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 A0A087WZY1 265 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 NPIPA5A0A0B4J1W7 369 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 OR2M5A3KFT3 312 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 C7orf72A4D263 438 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 KDM4EB2RXH2 506 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-205ENST00000556310 NPIPA7E9PJI5 369 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 C19orf84I3L1E1 186 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 TOXO94900 526 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 AVPP01185 164 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 IL6P05231 212 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 NPIPA8P0DM63 369 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 PEPDP12955 493 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 COX6B1P14854 86 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 ZNF17P17021 662 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 POU3F2P20265 443 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-205ENST00000556310 CHI3L1P36222 383 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-205ENST00000556310 MRPL19P49406 292 aaKnown RBP10.43□□□□□ -0.74
SLIRP-205ENST00000556310 ATP12AP54707 1039 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 TXNL4AP83876 142 aaKnown RBP10.43□□□□□ -0.74
SLIRP-205ENST00000556310 TFF3Q07654 80 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 TMEM44Q2T9K0 475 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 SLC25A35Q3KQZ1 300 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 KLHL26Q53HC5 615 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.43□□□□□ -0.74
SLIRP-205ENST00000556310 HEPHL1Q6MZM0 1159 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 MSANTD1Q6ZTZ1 278 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 C16orf62Q7Z3J2 963 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 ADGRE4PQ86SQ3 457 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 MIER2Q8N344 545 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 MEIOBQ8N635 442 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 ACBD4Q8NC06 268 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 NAXEQ8NCW5 288 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 CKAP2Q8WWK9 683 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 MAGEB18Q96M61 343 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 TRIB1Q96RU8 372 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 SDF2Q99470 211 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 TUBA1CQ9BQE3 449 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 PIGQQ9BRB3 760 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 NMUR2Q9GZQ4 415 aa10.43□□□□□ -0.74
SLIRP-205ENST00000556310 ZNF350Q9GZX5 532 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms