RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 GALNT8Q9NY28 637 aa11.36□□□□□ -0.59
SNX6-207ENST00000556303 ELOVL5Q9NYP7 299 aa11.36□□□□□ -0.59
SNX6-207ENST00000556303 SNX8Q9Y5X2 465 aa11.36□□□□□ -0.59
SNX6-207ENST00000556303 NIPBLQ6KC79 2804 aaeCLIP11.35□□□□□ -0.59
SNX6-207ENST00000556303 C17orf51A8MQB3 221 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 H3BML4 177 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 H3BNH8 94 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 RNASET2O00584 256 aaKnown RBP11.35□□□□□ -0.59
SNX6-207ENST00000556303 ADAMDEC1O15204 470 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 SKAP2O75563 359 aaPredicted RBP11.35□□□□□ -0.59
SNX6-207ENST00000556303 AK1P00568 194 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 GUSBP08236 651 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 G6PDP11413 515 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 KIR2DL2P43627 348 aaPredicted RBP11.35□□□□□ -0.59
SNX6-207ENST00000556303 ZNF41P51814 821 aaPredicted RBP11.35□□□□□ -0.59
SNX6-207ENST00000556303 SUMO3P55854 103 aaPredicted RBP11.35□□□□□ -0.59
SNX6-207ENST00000556303 SNTB1Q13884 538 aaKnown RBP11.35□□□□□ -0.59
SNX6-207ENST00000556303 CHI3L2Q15782 390 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 KLHL26Q53HC5 615 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 PDSS1Q5T2R2 415 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 ESPNLQ6ZVH7 1005 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 LUZP2Q86TE4 346 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 CDC20BQ86Y33 519 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 UBQLNLQ8IYU4 475 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 GCNT2Q8N0V5 402 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 VPS37AQ8NEZ2 397 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 OR8J2Q8NGG1 315 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 B4GALNT2Q8NHY0 566 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 LINC01560Q8TB33 94 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 SMPDL3BQ92485 455 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 JADE3Q92613 823 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 MBD6Q96DN6 1003 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 SLC39A3Q9BRY0 314 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 PINK1Q9BXM7 581 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 CXorf36Q9H7Y0 433 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 MED17Q9NVC6 651 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 GIMAP2Q9UG22 337 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 ST6GALNAC2Q9UJ37 374 aa11.35□□□□□ -0.59
SNX6-207ENST00000556303 PRRC2AP48634 2157 aaKnown RBP11.35□□□□□ -0.59
SNX6-207ENST00000556303 SH3D21A4FU49 640 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 CASKO14936 926 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 C6orf47O95873 294 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 AGR2O95994 175 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 IL11P20809 199 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 TCEA1P23193 301 aaKnown RBP11.34□□□□□ -0.59
SNX6-207ENST00000556303 ME2P23368 584 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 DNASE1P24855 282 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 ELK4P28324 431 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 SLC1A6P48664 564 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 ART1P52961 327 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 IST1P53990 364 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 ATP12AP54707 1039 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 CLDN20P56880 219 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 PON3Q15166 354 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 GUSBP1Q15486 140 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 SGCBQ16585 318 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 DPY19L1Q2PZI1 675 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 PLPPR5Q32ZL2 321 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 SPDYE7PQ495Y7 208 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 CEP85LQ5SZL2 805 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 ANXA8L1Q5VT79 327 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 AP1ARQ63HQ0 302 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 GTF2IRD2BQ6EKJ0 949 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 FAM214BQ7L5A3 538 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 GTF2IRD2Q86UP8 949 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 GGNQ86UU5 652 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 KRTCAP2Q8N6L1 136 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 ZNF781Q8N8C0 355 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 FNDC9Q8TBE3 224 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 FIG4Q92562 907 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 CDS1Q92903 461 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 CHMP6Q96FZ7 201 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 ZNF845Q96IR2 970 aaPredicted RBP11.34□□□□□ -0.59
SNX6-207ENST00000556303 ADGRG7Q96K78 797 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 YIPF4Q9BSR8 244 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 AKTIPQ9H8T0 292 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.34□□□□□ -0.59
SNX6-207ENST00000556303 MCTS1Q9ULC4 181 aaKnown RBP11.34□□□□□ -0.59
SNX6-207ENST00000556303 PCDHGB4Q9UN71 923 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 VDAC3Q9Y277 283 aa11.34□□□□□ -0.59
SNX6-207ENST00000556303 V9GYY5 206 aaPredicted RBP11.34□□□□□ -0.59
SNX6-207ENST00000556303 WDR91A4D1P6 747 aa11.33□□□□□ -0.6
SNX6-207ENST00000556303 CFLARO15519 480 aa11.33□□□□□ -0.6
SNX6-207ENST00000556303 SEC14L5O43304 696 aa11.33□□□□□ -0.6
SNX6-207ENST00000556303 ITM2AO43736 263 aa11.33□□□□□ -0.6
SNX6-207ENST00000556303 EIF4E2O60573 245 aaKnown RBP11.33□□□□□ -0.6
SNX6-207ENST00000556303 CGAP01215 116 aa11.33□□□□□ -0.6
SNX6-207ENST00000556303 PABPC4LP0CB38 370 aaKnown RBP11.33□□□□□ -0.6
SNX6-207ENST00000556303 EFNA1P20827 205 aaPredicted RBP11.33□□□□□ -0.6
SNX6-207ENST00000556303 PSMA4P25789 261 aaKnown RBP11.33□□□□□ -0.6
SNX6-207ENST00000556303 CD79BP40259 229 aa11.33□□□□□ -0.6
SNX6-207ENST00000556303 P2RX1P51575 399 aa11.33□□□□□ -0.6
SNX6-207ENST00000556303 CLNS1AP54105 237 aaKnown RBP11.33□□□□□ -0.6
SNX6-207ENST00000556303 SLC18A1P54219 525 aa11.33□□□□□ -0.6
SNX6-207ENST00000556303 HBA1P69905 142 aa11.33□□□□□ -0.6
SNX6-207ENST00000556303 STX3Q13277 289 aa11.33□□□□□ -0.6
SNX6-207ENST00000556303 DCST2Q5T1A1 773 aa11.33□□□□□ -0.6
SNX6-207ENST00000556303 CCNJQ5T5M9 372 aa11.33□□□□□ -0.6
SNX6-207ENST00000556303 FBXW10Q5XX13 1052 aa11.33□□□□□ -0.6
SNX6-207ENST00000556303 ZAR1Q86SH2 424 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms