RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 POLR3FQ9H1D9 316 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-218ENST00000556256 SLC35D1Q9NTN3 355 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 VNN3Q9NY84 501 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 DPM3Q9P2X0 92 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 ANAPC7Q9UJX3 599 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 PPIAL4CA0A0B4J2A2 164 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 SAGE2PA6NJ88 616 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 CLDN5O00501 218 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 CASKO14936 926 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 ANGPT2O15123 496 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 STX11O75558 287 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 B3GAT3O94766 335 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 IGF1P05019 195 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 HEXBP07686 556 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 P0C879 139 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 PPIAL4GP0DN37 164 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 CALCBP10092 127 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 TNNI3P19429 210 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 TPSB2P20231 275 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 ZP3P21754 424 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 PTBP1P26599 531 aaKnown RBP eCLIP2.08□□□□□ -2.08
SCFD1-218ENST00000556256 LIM2P55344 173 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 RIPPLY3P57055 190 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 ASAH1Q13510 395 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 ATXN7L3Q14CW9 347 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-218ENST00000556256 TPSAB1Q15661 275 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 CHI3L2Q15782 390 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 PRR4Q16378 134 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 SBK1Q52WX2 424 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 LANCL3Q6ZV70 420 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 CSNK1A1LQ8N752 337 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 M1APQ8TC57 530 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 DTNBP1Q96EV8 351 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 C4orf36Q96KX1 117 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 ZNF416Q9BWM5 594 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 NFKBIZQ9BYH8 718 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 DPH5Q9H2P9 285 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 RWDD1Q9H446 243 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-218ENST00000556256 RHOJQ9H4E5 214 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 PNO1Q9NRX1 252 aaKnown RBP2.08□□□□□ -2.08
SCFD1-218ENST00000556256 MRPL39Q9NYK5 338 aaKnown RBP2.08□□□□□ -2.08
SCFD1-218ENST00000556256 RDH8Q9NYR8 311 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 SAMD4AQ9UPU9 718 aaKnown RBP2.08□□□□□ -2.08
SCFD1-218ENST00000556256 MOKQ9UQ07 419 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 SMC3Q9UQE7 1217 aa2.08□□□□□ -2.08
SCFD1-218ENST00000556256 SF3B1O75533 1304 aaKnown RBP eCLIP2.08□□□□□ -2.08
SCFD1-218ENST00000556256 FAM74A7A6NL05 159 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 MAPK13O15264 365 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 SCRG1O75711 98 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 CABYRO75952 493 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 NOL4O94818 638 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 MFN2O95140 757 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 ANP32DO95626 131 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 MBD3O95983 291 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 ASNSP08243 561 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 HBQ1P09105 142 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 ZNF17P17021 662 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 NT5EP21589 574 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 TBXA2RP21731 343 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 KIF5BP33176 963 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 BDKRB1P46663 353 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 STARP49675 285 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 NOVA1P51513 510 aaKnown RBP2.07□□□□□ -2.08
SCFD1-218ENST00000556256 OSTNP61366 133 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 VLDLRP98155 873 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 CD47Q08722 323 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 SERTAD2Q14140 314 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 KCNJ11Q14654 390 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 GSG1Q2KHT4 349 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 TIGITQ495A1 244 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 FAM74A3Q4VXF1 159 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 TEX44Q53QW1 395 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 RABGAP1LQ5R372 815 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 MARC1Q5VT66 337 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 NCR3LG1Q68D85 454 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 SULT1C3Q6IMI6 304 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 ZSCAN4Q8NAM6 433 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-218ENST00000556256 OSTF1Q92882 214 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 FAF2Q96CS3 445 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 ZNF799Q96GE5 643 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 AKR1E2Q96JD6 320 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 OR5M11Q96RB7 305 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 KIR2DL4Q99706 377 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 CITED1Q99966 193 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 RTBDNQ9BSG5 229 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-218ENST00000556256 THUMPD2Q9BTF0 503 aaKnown RBP2.07□□□□□ -2.08
SCFD1-218ENST00000556256 DHX33Q9H6R0 707 aaKnown RBP2.07□□□□□ -2.08
SCFD1-218ENST00000556256 ZNF702PQ9H963 129 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 MEAF6Q9HAF1 191 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 ZNF275Q9NSD4 429 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-218ENST00000556256 WRAP73Q9P2S5 460 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-218ENST00000556256 SPRR3Q9UBC9 169 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 APOBEC3BQ9UH17 382 aaKnown RBP2.07□□□□□ -2.08
SCFD1-218ENST00000556256 CRLS1Q9UJA2 301 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 LAMP5Q9UJQ1 280 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 CHMP2BQ9UQN3 213 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 CA5BQ9Y2D0 317 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 GSTK1Q9Y2Q3 226 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 SPACA6W5XKT8 324 aa2.07□□□□□ -2.08
SCFD1-218ENST00000556256 IGLV8-61A0A075B6I0 122 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms