RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 KCNE3Q9Y6H6 103 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 PCNX3Q9H6A9 2034 aa16.6■□□□□ 0.25
NEDD1-208ENST00000555806 RNF103-CHMP3A0A140T963 221 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 A0A1W2PNV4 684 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 A0A1W2PQD3 144 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 TUBAL3A6NHL2 446 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 RNASET2O00584 256 aaKnown RBP16.59■□□□□ 0.25
NEDD1-208ENST00000555806 SOX30O94993 753 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 ZNF17P17021 662 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 RNF144AP50876 292 aaPredicted RBP16.59■□□□□ 0.25
NEDD1-208ENST00000555806 WDR4P57081 412 aaKnown RBP16.59■□□□□ 0.25
NEDD1-208ENST00000555806 MAGOHP61326 146 aaKnown RBP16.59■□□□□ 0.25
NEDD1-208ENST00000555806 RPS26P62854 115 aaKnown RBP16.59■□□□□ 0.25
NEDD1-208ENST00000555806 EEF1A1P68104 462 aaKnown RBP16.59■□□□□ 0.25
NEDD1-208ENST00000555806 CD226Q15762 336 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 SGCBQ16585 318 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 EEF1A1P5Q5VTE0 462 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 PPP4R4Q6NUP7 873 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 C6orf120Q7Z4R8 191 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 CLEC4FQ8N1N0 589 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 ZNF614Q8N883 585 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 CNEP1R1Q8N9A8 125 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 OR8J2Q8NGG1 315 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 OR5D16Q8NGK9 328 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 B4GALNT2Q8NHY0 566 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 FAM222BQ8WU58 562 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 ZBTB8AQ96BR9 441 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 ZNF845Q96IR2 970 aaPredicted RBP16.59■□□□□ 0.25
NEDD1-208ENST00000555806 SLC35G5Q96KT7 338 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 GPATCH1Q9BRR8 931 aaKnown RBP16.59■□□□□ 0.25
NEDD1-208ENST00000555806 HOXD1Q9GZZ0 328 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 PIGMQ9H3S5 423 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 MED17Q9NVC6 651 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 NKIRAS1Q9NYS0 192 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 PACSIN3Q9UKS6 424 aa16.59■□□□□ 0.25
NEDD1-208ENST00000555806 H3BNH8 94 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 EIF1AYO14602 144 aaKnown RBP16.58■□□□□ 0.24
NEDD1-208ENST00000555806 TNFRSF21O75509 655 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 CPSF4O95639 269 aaKnown RBP16.58■□□□□ 0.24
NEDD1-208ENST00000555806 MATN1P21941 496 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 CPOXP36551 454 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 CLNS1AP54105 237 aaKnown RBP16.58■□□□□ 0.24
NEDD1-208ENST00000555806 SORDQ00796 357 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 PON3Q15166 354 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 TMEM44Q2T9K0 475 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 PLPPR5Q32ZL2 321 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 ANXA8L1Q5VT79 327 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 ANKRD46Q86W74 232 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 LRRC34Q8IZ02 419 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 GTPBP8Q8N3Z3 284 aaPredicted RBP16.58■□□□□ 0.24
NEDD1-208ENST00000555806 METTL25Q8N6Q8 603 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 LINC01560Q8TB33 94 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 FNDC9Q8TBE3 224 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 ACTRT2Q8TDY3 377 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 RNF145Q96MT1 663 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 POLDIP3Q9BY77 421 aaKnown RBP16.58■□□□□ 0.24
NEDD1-208ENST00000555806 THAP1Q9NVV9 213 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 GALNT8Q9NY28 637 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 MARCOQ9UEW3 520 aaPredicted RBP16.58■□□□□ 0.24
NEDD1-208ENST00000555806 MED12LQ86YW9 2145 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 ANKRD17O75179 2603 aaKnown RBP16.58■□□□□ 0.24
NEDD1-208ENST00000555806 OTOGQ6ZRI0 2925 aa16.58■□□□□ 0.24
NEDD1-208ENST00000555806 ANKHD1Q8IWZ3 2542 aaKnown RBP16.57■□□□□ 0.24
NEDD1-208ENST00000555806 NUP214P35658 2090 aaPredicted RBP16.57■□□□□ 0.24
NEDD1-208ENST00000555806 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 CTAG2O75638 210 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 TNFSF13O75888 250 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 SMNDC1O75940 238 aaKnown RBP eCLIP16.57■□□□□ 0.24
NEDD1-208ENST00000555806 NUDT14O95848 222 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 CRHP06850 196 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 KITP10721 976 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 EIF1AXP47813 144 aaKnown RBP16.57■□□□□ 0.24
NEDD1-208ENST00000555806 ATP12AP54707 1039 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 NME5P56597 212 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 SIRPAP78324 504 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 ZNF117Q03924 483 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 BEND6Q5SZJ8 279 aaPredicted RBP16.57■□□□□ 0.24
NEDD1-208ENST00000555806 FBXW10Q5XX13 1052 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 ATG16L1Q676U5 607 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 MTERF4Q7Z6M4 381 aaKnown RBP16.57■□□□□ 0.24
NEDD1-208ENST00000555806 GGNQ86UU5 652 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 WDR75Q8IWA0 830 aaKnown RBP16.57■□□□□ 0.24
NEDD1-208ENST00000555806 VPS37AQ8NEZ2 397 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 TESCQ96BS2 214 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 NPAS1Q99742 590 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 TMBIM4Q9HC24 238 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 ZNF175Q9Y473 711 aa16.57■□□□□ 0.24
NEDD1-208ENST00000555806 PRSS51A0A1B0GVH4 220 aa16.56■□□□□ 0.24
NEDD1-208ENST00000555806 DUXAA6NLW8 204 aa16.56■□□□□ 0.24
NEDD1-208ENST00000555806 A6NNC1 897 aa16.56■□□□□ 0.24
NEDD1-208ENST00000555806 E9PBE3 544 aa16.56■□□□□ 0.24
NEDD1-208ENST00000555806 GTPBP1O00178 669 aaKnown RBP16.56■□□□□ 0.24
NEDD1-208ENST00000555806 SDHDO14521 159 aa16.56■□□□□ 0.24
NEDD1-208ENST00000555806 OPN1LWP04000 364 aa16.56■□□□□ 0.24
NEDD1-208ENST00000555806 ME2P23368 584 aa16.56■□□□□ 0.24
NEDD1-208ENST00000555806 DPY19L1Q2PZI1 675 aa16.56■□□□□ 0.24
NEDD1-208ENST00000555806 KLHL26Q53HC5 615 aa16.56■□□□□ 0.24
NEDD1-208ENST00000555806 SPANXN4Q5MJ08 99 aa16.56■□□□□ 0.24
NEDD1-208ENST00000555806 VWA1Q6PCB0 445 aa16.56■□□□□ 0.24
NEDD1-208ENST00000555806 NRGNQ92686 78 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms