RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 CASQ2O14958 399 aaPredicted RBP9.37□□□□□ -0.91
SRP54-208ENST00000555557 GMFGO60234 142 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 HS6ST1O60243 411 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 OR6B1O95007 311 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 SERPINA7P05543 415 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 ZNF23P17027 643 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 ITGA2P17301 1181 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 TBXA2RP21731 343 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 PRKACGP22612 351 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 SOX3P41225 446 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 RGS8P57771 180 aaPredicted RBP9.37□□□□□ -0.91
SRP54-208ENST00000555557 SPIBQ01892 262 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 CHAF1BQ13112 559 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 FGFBP1Q14512 234 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 OGFRL1Q5TC84 451 aaPredicted RBP9.37□□□□□ -0.91
SRP54-208ENST00000555557 RNF220Q5VTB9 566 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 BICRALQ6AI39 1079 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 IL20RBQ6UXL0 311 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 KBTBD2Q8IY47 623 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 OR10G3Q8NGC4 313 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 SLC22A8Q8TCC7 542 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 PHOSPHO1Q8TCT1 267 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 PSMF1Q92530 271 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 EME1Q96AY2 570 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 SLC29A1Q99808 456 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 HOXD1Q9GZZ0 328 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 COQ10BQ9H8M1 238 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.37□□□□□ -0.91
SRP54-208ENST00000555557 ANKRD10Q9NXR5 420 aa9.37□□□□□ -0.91
SRP54-208ENST00000555557 DNAJB12Q9NXW2 375 aaKnown RBP9.37□□□□□ -0.91
SRP54-208ENST00000555557 CFAP47Q6ZTR5 3102 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 CPSF4LA6NMK7 179 aaKnown RBP9.36□□□□□ -0.91
SRP54-208ENST00000555557 SOCS2O14508 198 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 OIP5O43482 229 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 TLX3O43711 291 aaPredicted RBP9.36□□□□□ -0.91
SRP54-208ENST00000555557 SCO2O43819 266 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 E2F6O75461 281 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 PRSS23O95084 383 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 CSTAP01040 98 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 HOXB6P17509 224 aaKnown RBP9.36□□□□□ -0.91
SRP54-208ENST00000555557 RHCEP18577 417 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 ITGA3P26006 1051 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 EVI2BP34910 448 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 RYKP34925 604 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 ZNF136P52737 540 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 CDH12P55289 794 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 MLF1P58340 268 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 RAPSNQ13702 412 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 EIPR1Q53HC9 387 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 OTUD3Q5T2D3 398 aaPredicted RBP9.36□□□□□ -0.91
SRP54-208ENST00000555557 ZNF468Q5VIY5 522 aaPredicted RBP9.36□□□□□ -0.91
SRP54-208ENST00000555557 ANKRD34AQ69YU3 496 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 CBLN3Q6UW01 205 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 GALNT4Q8N4A0 578 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 ZNF527Q8NB42 609 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 GRHL3Q8TE85 626 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 FGF11Q92914 225 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 HGDQ93099 445 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 ZNF347Q96SE7 839 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 MCHR1Q99705 422 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 PIP5K1AQ99755 562 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 KLHDC3Q9BQ90 382 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 A4GNTQ9UNA3 340 aa9.36□□□□□ -0.91
SRP54-208ENST00000555557 YARS2Q9Y2Z4 477 aaKnown RBP9.36□□□□□ -0.91
SRP54-208ENST00000555557 SAMHD1Q9Y3Z3 626 aaKnown RBP9.36□□□□□ -0.91
SRP54-208ENST00000555557 ARGFXA6NJG6 315 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 EFSO43281 561 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 FADS1O60427 444 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 DNAJB5O75953 348 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 NTN1O95631 604 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 FBXO45P0C2W1 286 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 HTR2AP28223 471 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 VHLP40337 213 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 ENTPD8Q5MY95 495 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 FNDC7Q5VTL7 733 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 ZBTB49Q6ZSB9 765 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 ZNF605Q86T29 641 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 CBR4Q8N4T8 237 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 SLC5A8Q8N695 610 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 POGLUT1Q8NBL1 392 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 PHF10Q8WUB8 498 aaKnown RBP9.35□□□□□ -0.91
SRP54-208ENST00000555557 SPACA9Q96E40 222 aaPredicted RBP9.35□□□□□ -0.91
SRP54-208ENST00000555557 SH3YL1Q96HL8 342 aaPredicted RBP9.35□□□□□ -0.91
SRP54-208ENST00000555557 TBL1XR1Q9BZK7 514 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 ARMC7Q9H6L4 198 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 REEP1Q9H902 201 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 NMNAT1Q9HAN9 279 aaPredicted RBP9.35□□□□□ -0.91
SRP54-208ENST00000555557 GALNT9Q9HCQ5 603 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 ATP13A2Q9NQ11 1180 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 ACER3Q9NUN7 267 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 CARD8Q9Y2G2 431 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 C15orf41Q9Y2V0 281 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 MSRB2Q9Y3D2 182 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 LYVE1Q9Y5Y7 322 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 A6NL46 340 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 ALG1L2C9J202 215 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 G3V2T6 193 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 GTPBP1O00178 669 aaKnown RBP9.35□□□□□ -0.91
SRP54-208ENST00000555557 TNFRSF11BO00300 401 aa9.35□□□□□ -0.91
SRP54-208ENST00000555557 AP3D1O14617 1153 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms