RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 POU3F2P20265 443 aaPredicted RBP18.52■□□□□ 0.56
VTI1B-205ENST00000555543 UQCRC2P22695 453 aa18.52■□□□□ 0.56
VTI1B-205ENST00000555543 FLYWCH1Q4VC44 716 aa18.52■□□□□ 0.56
VTI1B-205ENST00000555543 GDF7Q7Z4P5 450 aa18.52■□□□□ 0.56
VTI1B-205ENST00000555543 VPS37AQ8NEZ2 397 aa18.52■□□□□ 0.56
VTI1B-205ENST00000555543 C7orf26Q96N11 449 aa18.52■□□□□ 0.56
VTI1B-205ENST00000555543 OR51I1Q9H343 314 aa18.52■□□□□ 0.56
VTI1B-205ENST00000555543 RUBCNLQ9H714 662 aa18.52■□□□□ 0.56
VTI1B-205ENST00000555543 VIPAS39Q9H9C1 493 aa18.52■□□□□ 0.56
VTI1B-205ENST00000555543 BTNL2Q9UIR0 455 aa18.52■□□□□ 0.56
VTI1B-205ENST00000555543 USH1CQ9Y6N9 552 aa18.52■□□□□ 0.56
VTI1B-205ENST00000555543 H3BML4 177 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 DYNC1I1O14576 645 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 HCRTR2O43614 444 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 SASH3O75995 380 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 PGRP06401 933 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 CDKN2CP42773 168 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 AGFG1P52594 562 aaKnown RBP18.51■□□□□ 0.55
VTI1B-205ENST00000555543 SUCLG1P53597 346 aaKnown RBP18.51■□□□□ 0.55
VTI1B-205ENST00000555543 DLX5P56178 289 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 ZNF117Q03924 483 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 BCL2A1Q16548 175 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 PDCD4Q53EL6 469 aaKnown RBP18.51■□□□□ 0.55
VTI1B-205ENST00000555543 KLHL26Q53HC5 615 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 SAXO2Q658L1 398 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 TNFAIP8L2Q6P589 184 aaPredicted RBP18.51■□□□□ 0.55
VTI1B-205ENST00000555543 CHDHQ8NE62 594 aaPredicted RBP18.51■□□□□ 0.55
VTI1B-205ENST00000555543 GOT1L1Q8NHS2 421 aaPredicted RBP18.51■□□□□ 0.55
VTI1B-205ENST00000555543 MIPOL1Q8TD10 442 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 UCN2Q96RP3 112 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 SDF2Q99470 211 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 PIGQQ9BRB3 760 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 INPP5KQ9BT40 448 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 CSMD2Q7Z408 3487 aa18.51■□□□□ 0.55
VTI1B-205ENST00000555543 PDZD2O15018 2839 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 HMGB1P1B2RPK0 211 aaPredicted RBP18.5■□□□□ 0.55
VTI1B-205ENST00000555543 DVL2O14641 736 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 DIAPH2O60879 1101 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 SOX30O94993 753 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 PEPDP12955 493 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 IDO1P14902 403 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 CLDN20P56880 219 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 FOXF2Q12947 444 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 PLPPR5Q32ZL2 321 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 NDUFAF6Q330K2 333 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 GLYR1Q49A26 553 aaPredicted RBP18.5■□□□□ 0.55
VTI1B-205ENST00000555543 EPGNQ6UW88 154 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 MISPQ8IVT2 679 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 DMRTC2Q8IXT2 367 aaPredicted RBP18.5■□□□□ 0.55
VTI1B-205ENST00000555543 PHOSPHO1Q8TCT1 267 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 LRRC8CQ8TDW0 803 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 WNT2BQ93097 391 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 NEURL3Q96EH8 262 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 SLC35A5Q9BS91 424 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 MED17Q9NVC6 651 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 ZNF629Q9UEG4 869 aaPredicted RBP18.5■□□□□ 0.55
VTI1B-205ENST00000555543 KCNE5Q9UJ90 142 aa18.5■□□□□ 0.55
VTI1B-205ENST00000555543 CENPVL1A0A0U1RR11 272 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 DUXAA6NLW8 204 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 SEC14L5O43304 696 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 FCMRO60667 390 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 TNFRSF21O75509 655 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 TGM6O95932 706 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 TMIGD3P0DMS9 266 aaPredicted RBP18.49■□□□□ 0.55
VTI1B-205ENST00000555543 OR12D1P0DN82 309 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 CTSSP25774 331 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 ATP12AP54707 1039 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 FUT5Q11128 374 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 CBLN3Q6UW01 205 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 GCNT2Q8N0V5 402 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 GOLGA6L1Q8N7Z2 621 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 ZNF527Q8NB42 609 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 OR9I1Q8NGQ6 314 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 B4GALNT2Q8NHY0 566 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 SMPDL3BQ92485 455 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 RAB8BQ92930 207 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 OR52E6Q96RD3 313 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 ZBTB18Q99592 522 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 ZNF350Q9GZX5 532 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 HOXD1Q9GZZ0 328 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 SDR39U1Q9NRG7 319 aaPredicted RBP18.49■□□□□ 0.55
VTI1B-205ENST00000555543 CARD8Q9Y2G2 431 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 POLQO75417 2590 aa18.49■□□□□ 0.55
VTI1B-205ENST00000555543 A0A087WZY1 265 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 LINC01387J3KSC0 135 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 UBDO15205 165 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 SLC22A3O75751 556 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 RCBTB2O95199 551 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 ZNF17P17021 662 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 PSMA4P25789 261 aaKnown RBP18.48■□□□□ 0.55
VTI1B-205ENST00000555543 CHI3L1P36222 383 aaPredicted RBP18.48■□□□□ 0.55
VTI1B-205ENST00000555543 ASCL1P50553 236 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 PPP2R2AP63151 447 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 SNTB1Q13884 538 aaKnown RBP18.48■□□□□ 0.55
VTI1B-205ENST00000555543 GSTA3Q16772 222 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 ARHGAP11BQ3KRB8 267 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 PDZK1Q5T2W1 519 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 HEPHL1Q6MZM0 1159 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 MTERF4Q7Z6M4 381 aaKnown RBP18.48■□□□□ 0.55
VTI1B-205ENST00000555543 GGNQ86UU5 652 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms