RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 A0A1W2PQD3 144 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 MBD3L4A6NDZ8 208 aaPredicted RBP12.35□□□□□ -0.43
SNX6-203ENST00000555416 MBD3L3A6NE82 208 aaPredicted RBP12.35□□□□□ -0.43
SNX6-203ENST00000555416 CCDC154A6NI56 674 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 MBD3L5A6NJ08 208 aaPredicted RBP12.35□□□□□ -0.43
SNX6-203ENST00000555416 CD8B2A6NJW9 211 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 CLCA1A8K7I4 914 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 H0Y3Z8 333 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 UBDO15205 165 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 HNRNPRO43390 633 aaKnown RBP12.35□□□□□ -0.43
SNX6-203ENST00000555416 TNFRSF21O75509 655 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 SLC22A3O75751 556 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 KRT16P08779 473 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 IDO1P14902 403 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 LCN1P31025 176 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 DLX5P56178 289 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 CLDN20P56880 219 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 ZNF117Q03924 483 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 FOXF2Q12947 444 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 GTDC1Q4AE62 458 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 COX20Q5RI15 118 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 HEPHL1Q6MZM0 1159 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 AAGABQ6PD74 315 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 CBLN3Q6UW01 205 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 ENPP6Q6UWR7 440 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 HMGN2P46Q86SG4 172 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 LSRQ86X29 649 aaPredicted RBP12.35□□□□□ -0.43
SNX6-203ENST00000555416 LACC1Q8IV20 430 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 UBQLNLQ8IYU4 475 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 GOLGA6L1Q8N7Z2 621 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 CHDHQ8NE62 594 aaPredicted RBP12.35□□□□□ -0.43
SNX6-203ENST00000555416 MBD3L2Q8NHZ7 208 aaPredicted RBP12.35□□□□□ -0.43
SNX6-203ENST00000555416 ZPLD1Q8TCW7 415 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 NEURL3Q96EH8 262 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 THOC1Q96FV9 657 aaKnown RBP12.35□□□□□ -0.43
SNX6-203ENST00000555416 TRIM8Q9BZR9 551 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 ENKD1Q9H0I2 346 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 CLCF1Q9UBD9 225 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 APCP25054 2843 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 LRBAP50851 2863 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 SCDO00767 359 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 BCAS1O75363 584 aaPredicted RBP12.34□□□□□ -0.43
SNX6-203ENST00000555416 TGM6O95932 706 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 OPN1LWP04000 364 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 IGFBP2P18065 325 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 IL11P20809 199 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 ATP6V1C1P21283 382 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 PSMA4P25789 261 aaKnown RBP12.34□□□□□ -0.43
SNX6-203ENST00000555416 TIMP3P35625 211 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 ATP12AP54707 1039 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 AQP5P55064 265 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 SNTB1Q13884 538 aaKnown RBP12.34□□□□□ -0.43
SNX6-203ENST00000555416 GANABQ14697 944 aaKnown RBP12.34□□□□□ -0.43
SNX6-203ENST00000555416 TOMM34Q15785 309 aaPredicted RBP12.34□□□□□ -0.43
SNX6-203ENST00000555416 MAPK14Q16539 360 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 GSTA3Q16772 222 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 ARHGAP11BQ3KRB8 267 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 FLYWCH1Q4VC44 716 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 PDZK1Q5T2W1 519 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 BHLHB9Q6PI77 547 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 DNAJC14Q6Y2X3 702 aaPredicted RBP12.34□□□□□ -0.43
SNX6-203ENST00000555416 RNF130Q86XS8 419 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 MCEMP1Q8IX19 187 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 VPS37AQ8NEZ2 397 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 POC1BQ8TC44 478 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 PNPT1Q8TCS8 783 aaKnown RBP12.34□□□□□ -0.43
SNX6-203ENST00000555416 PHOSPHO1Q8TCT1 267 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 DYDC1Q8WWB3 177 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 XAGE5Q8WWM1 108 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 VPS33AQ96AX1 596 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 ZG16BQ96DA0 208 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 PANX1Q96RD7 426 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 TREX2Q9BQ50 279 aaPredicted RBP12.34□□□□□ -0.43
SNX6-203ENST00000555416 ZNF350Q9GZX5 532 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 PTGES2Q9H7Z7 377 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 CALHM2Q9HA72 323 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 KCNJ16Q9NPI9 418 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 MED17Q9NVC6 651 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 ZIM2Q9NZV7 527 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 MKLN1Q9UL63 735 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 CARD8Q9Y2G2 431 aa12.34□□□□□ -0.43
SNX6-203ENST00000555416 H3BML4 177 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 HMGN4O00479 90 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 SEC14L5O43304 696 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 HCRTR2O43614 444 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 EFNA2O43921 213 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 COX6B1P14854 86 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 HPGDP15428 266 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 POU3F2P20265 443 aaPredicted RBP12.33□□□□□ -0.44
SNX6-203ENST00000555416 BMP5P22003 454 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 MSX1P28360 303 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 GCKP35557 465 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 CHI3L1P36222 383 aaPredicted RBP12.33□□□□□ -0.44
SNX6-203ENST00000555416 POLR2JP52435 117 aaKnown RBP12.33□□□□□ -0.44
SNX6-203ENST00000555416 MVDP53602 400 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 PLAURQ03405 335 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 RCAN2Q14206 197 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 GPR68Q15743 365 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 MAPK11Q15759 364 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 BCL2A1Q16548 175 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms