RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 IL1F10Q8WWZ1 152 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 RLN3Q8WXF3 142 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 RPL3LQ92901 407 aaKnown RBP4.16□□□□□ -1.74
VRK1-205ENST00000555402 PPP1R16AQ96I34 528 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 CRNKL1Q9BZJ0 848 aaKnown RBP4.16□□□□□ -1.74
VRK1-205ENST00000555402 EHFQ9NZC4 300 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 RSPH14Q9UHP6 348 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 ESYT2A0FGR8 921 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 CLRN2A0PK11 232 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 MBLAC1A4D2B0 266 aaPredicted RBP4.15□□□□□ -1.75
VRK1-205ENST00000555402 SAGE2PA6NJ88 616 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 TRIM64CA6NLI5 447 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 A8MX80 341 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 RIPK2O43353 540 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 TPST2O60704 377 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 NOL4O94818 638 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 SLC2A10O95528 541 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 LAMP1P11279 417 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 CPN1P15169 458 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 FNTAP49354 379 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 ACTR1AP61163 376 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 LMO4P61968 165 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 HMGN5P82970 282 aaKnown RBP4.15□□□□□ -1.75
VRK1-205ENST00000555402 OTUD4Q01804 1114 aaKnown RBP4.15□□□□□ -1.75
VRK1-205ENST00000555402 SERTAD2Q14140 314 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 LPAL2Q16609 132 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 EIPR1Q53HC9 387 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 TTC23Q5W5X9 447 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 NAXDQ8IW45 347 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 CSNK1A1LQ8N752 337 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 Q8N9G6 341 aaPredicted RBP4.15□□□□□ -1.75
VRK1-205ENST00000555402 RIT2Q99578 217 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 OMDQ99983 421 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 TM2D1Q9BX74 207 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 ELOVL4Q9GZR5 314 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 GLT8D2Q9H1C3 349 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 OPN3Q9H1Y3 402 aaPredicted RBP4.15□□□□□ -1.75
VRK1-205ENST00000555402 CLEC5AQ9NY25 188 aa4.15□□□□□ -1.75
VRK1-205ENST00000555402 CACNA1FO60840 1977 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 FCN1O00602 326 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 EFNA2O43921 213 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 GPRIN2O60269 458 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 F10P00742 488 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 PDHBP11177 359 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 PGAM2P15259 253 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 HNF1AP20823 631 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 TBXA2RP21731 343 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 CALB2P22676 271 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 NF2P35240 595 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 DHPSP49366 369 aaPredicted RBP4.14□□□□□ -1.75
VRK1-205ENST00000555402 PPT1P50897 306 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 SLC8A3P57103 927 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 RND3P61587 244 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 PAX2Q02962 417 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 ZNF154Q13106 437 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 SYPL1Q16563 259 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 PYHIN1Q6K0P9 492 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 PMF1Q6P1K2 205 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 GCNT7Q6ZNI0 430 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 TMEM110Q86TL2 294 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 SERINC5Q86VE9 423 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 SLC38A6Q8IZM9 456 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 RHOXF1Q8NHV9 184 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 ADAMTS16Q8TE57 1224 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 AENQ8WTP8 325 aaKnown RBP4.14□□□□□ -1.75
VRK1-205ENST00000555402 FAM222BQ8WU58 562 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 OR5M11Q96RB7 305 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 SLC6A7Q99884 636 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 DUSP16Q9BY84 665 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 NT5C3AQ9H0P0 336 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 NXF5Q9H1B4 397 aaKnown RBP4.14□□□□□ -1.75
VRK1-205ENST00000555402 PNO1Q9NRX1 252 aaKnown RBP4.14□□□□□ -1.75
VRK1-205ENST00000555402 SMPD3Q9NY59 655 aaPredicted RBP4.14□□□□□ -1.75
VRK1-205ENST00000555402 XPO7Q9UIA9 1087 aaKnown RBP4.14□□□□□ -1.75
VRK1-205ENST00000555402 LCMT1Q9UIC8 334 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 ALG6Q9Y672 507 aa4.14□□□□□ -1.75
VRK1-205ENST00000555402 GON4LQ3T8J9 2241 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 SRRM5B3KS81 715 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 E9PLD3 99 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 SPAG6O75602 509 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 SLC35E2P0CK97 266 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 HPCAL1P37235 193 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 KRTAP12-2P59991 146 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 ST3GAL3Q11203 375 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 GPM6BQ13491 265 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 KCNJ11Q14654 390 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 TIMM50Q3ZCQ8 353 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 GGTA1PQ4G0N0 100 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 C10orf120Q5SQS8 335 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 TMEM225Q6GV28 225 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 ZNF683Q8IZ20 524 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 LINC01561Q8N1V8 128 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 CLDN19Q8N6F1 224 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 ANKFN1Q8N957 763 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 SYT14Q8NB59 555 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 STEAP2Q8NFT2 490 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 CCDC26Q8TAB7 109 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 SLC5A11Q8WWX8 675 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 TMEM80Q96HE8 168 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 C12orf66Q96MD2 445 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms