RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 M0QX08 132 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 CBX7O95931 251 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 CLPSP04118 112 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 SFTPCP11686 197 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 DDX5P17844 614 aaKnown RBP9.09□□□□□ -0.95
PSEN1-213ENST00000555386 S1PR1P21453 382 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 EEF1B2P24534 225 aaKnown RBP9.09□□□□□ -0.95
PSEN1-213ENST00000555386 IGFBP5P24593 272 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 ELK4P28324 431 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 GALNSP34059 522 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 SOX18P35713 384 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 IST1P53990 364 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 ISL1P61371 349 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 FUT7Q11130 342 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 MAP4K2Q12851 820 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 ZNF155Q12901 538 aaPredicted RBP9.09□□□□□ -0.95
PSEN1-213ENST00000555386 FADDQ13158 208 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 DUSP8Q13202 625 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 DCTN2Q13561 401 aaKnown RBP9.09□□□□□ -0.95
PSEN1-213ENST00000555386 RGNQ15493 299 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 SOWAHCQ53LP3 525 aaPredicted RBP9.09□□□□□ -0.95
PSEN1-213ENST00000555386 KDM4DQ6B0I6 523 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 SPINK14Q6IE38 97 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 H3F3CQ6NXT2 135 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 TMEM179BQ7Z7N9 219 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 SLC30A8Q8IWU4 369 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 RBMXL3Q8N7X1 1067 aaKnown RBP9.09□□□□□ -0.95
PSEN1-213ENST00000555386 ZNF615Q8N8J6 731 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 C11orf65Q8NCR3 313 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 OR5L2Q8NGL0 311 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 OR4A15Q8NGL6 344 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 OR5AK3PQ8NH89 298 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 C16orf52Q8NHV5 167 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 ASB15Q8WXK1 588 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 OTUB1Q96FW1 271 aaPredicted RBP9.09□□□□□ -0.95
PSEN1-213ENST00000555386 HSH2DQ96JZ2 352 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 EPYCQ99645 322 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 UTP23Q9BRU9 249 aaKnown RBP9.09□□□□□ -0.95
PSEN1-213ENST00000555386 YIPF4Q9BSR8 244 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 ITPAQ9BY32 194 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 WWTR1Q9GZV5 400 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 KLHL1Q9NR64 748 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 TAS2R7Q9NYW3 318 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 MYOTQ9UBF9 498 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 TUBD1Q9UJT1 453 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 PPIEQ9UNP9 301 aaKnown RBP9.09□□□□□ -0.95
PSEN1-213ENST00000555386 ERVK-11Q9UQG0 969 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 FREM3P0C091 2139 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 G3V3Y1 287 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 H3BMQ9 156 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 BCKDKO14874 412 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 SUV39H1O43463 412 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 ZNF354AO60765 605 aaPredicted RBP9.08□□□□□ -0.96
PSEN1-213ENST00000555386 PRAMEF2O60811 474 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 PIGAP37287 484 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 CD96P40200 585 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 CASRP41180 1078 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 SOX3P41225 446 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 SSR4P51571 173 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 CASP9P55211 416 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 CD47Q08722 323 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 EBPQ15125 230 aaKnown RBP9.08□□□□□ -0.96
PSEN1-213ENST00000555386 TUBA3EQ6PEY2 450 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 CROCCP3Q8IVE0 287 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 HS3ST5Q8IZT8 346 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 SPARTQ8N0X7 666 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 OR7G1Q8NGA0 311 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 OR52N2Q8NGI0 321 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 ZNF675Q8TD23 568 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 RAB2BQ8WUD1 216 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 ELP4Q96EB1 424 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 WBP1Q96G27 269 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 COG8Q96MW5 612 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 SIGLEC12Q96PQ1 595 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 LMF1Q96S06 567 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 RASL10BQ96S79 203 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 APOL4Q9BPW4 351 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 BCL7BQ9BQE9 202 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 DOHHQ9BU89 302 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 HES7Q9BYE0 225 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 TMEM38AQ9H6F2 299 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 REEP1Q9H902 201 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 LRFN1Q9P244 771 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 FAF1Q9UNN5 650 aaPredicted RBP9.08□□□□□ -0.96
PSEN1-213ENST00000555386 ABCG2Q9UNQ0 655 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 PCDHGB1Q9Y5G3 927 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 SNX5Q9Y5X3 404 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 EXPH5Q8NEV8 1989 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 OR5H15A6NDH6 313 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 OR6C76A6NM76 312 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 A8MVJ9 347 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 SLC1A7O00341 560 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 TBX19O60806 448 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 IFNA14P01570 189 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 YAP1P46937 504 aaKnown RBP9.08□□□□□ -0.96
PSEN1-213ENST00000555386 RFX3P48380 749 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 CYB561P49447 251 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 EMDP50402 254 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 CSNK2BP67870 215 aa9.08□□□□□ -0.96
PSEN1-213ENST00000555386 TP53BP2Q13625 1128 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms