RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 RAB33BQ9H082 229 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 RHOJQ9H4E5 214 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 RMND5AQ9H871 391 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 PNO1Q9NRX1 252 aaKnown RBP4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 SNX6Q9UNH7 406 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 MRPS7Q9Y2R9 242 aaKnown RBP4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 KIF16BQ96L93 1317 aa4.11□□□□□ -1.75
CKS1BP1-201ENST00000555221 TARBP1Q13395 1621 aaKnown RBP4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 IGHV3-35A0A0C4DH35 117 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 ESYT2A0FGR8 921 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 SAGE2PA6NJ88 616 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 E9PLD3 99 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 NOL4O94818 638 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 TBXA2RP21731 343 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 PTBP1P26599 531 aaKnown RBP eCLIP4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 CHI3L1P36222 383 aaPredicted RBP4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 TAF6P49848 677 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 ASAH1Q13510 395 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 KCNJ11Q14654 390 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 GLYR1Q49A26 553 aaPredicted RBP4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 SLC22A10Q63ZE4 541 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 CES3Q6UWW8 571 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 APTXQ7Z2E3 356 aaKnown RBP4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 HPS6Q86YV9 775 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 C9orf40Q8IXQ3 194 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 CADM2Q8N3J6 435 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 OR9A4Q8NGU2 314 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 OR2T34Q8NGX1 318 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 CNIH3Q8TBE1 160 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 GTSF1Q8WW33 167 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 DPH7Q9BTV6 452 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 ALG12Q9BV10 488 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 RPS10P5Q9NQ39 176 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 ABCD2Q9UBJ2 740 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 ZNF107Q9UII5 783 aaPredicted RBP4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 TMCC3Q9ULS5 477 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 SAMD4AQ9UPU9 718 aaKnown RBP4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 L3MBTL1Q9Y468 752 aa4.1□□□□□ -1.75
CKS1BP1-201ENST00000555221 A0A1W2PNV4 684 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 XPO1O14980 1071 aaKnown RBP4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 ZSCAN12O43309 604 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 OR1F1O43749 312 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 NUDT21O43809 227 aaKnown RBP4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 TSC22D2O75157 780 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 BCAS1O75363 584 aaPredicted RBP4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 B3GAT3O94766 335 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 IGF1P05019 195 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 RPA2P15927 270 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 NT5EP21589 574 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 GDF1P27539 372 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 PRPHP41219 470 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 BDKRB1P46663 353 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 IFNAR2P48551 515 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 DHPSP49366 369 aaPredicted RBP4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 PLA2G16P53816 162 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 ERVPABLB-1P60509 514 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 RPL32P62910 135 aaKnown RBP4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 VLDLRP98155 873 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 CNTN2Q02246 1040 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 RIPPLY1Q0D2K3 151 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 PJVKQ0ZLH3 352 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 GSG1Q2KHT4 349 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 PAN3Q58A45 887 aaKnown RBP4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 CGB2Q6NT52 195 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 ACSM5Q6NUN0 579 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 VITQ6UXI7 678 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 Q6ZR54 194 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 SERPINA9Q86WD7 417 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 DENND6BQ8NEG7 585 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 M1APQ8TC57 530 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 AENQ8WTP8 325 aaKnown RBP4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 TRUB1Q8WWH5 349 aaKnown RBP4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 OSTF1Q92882 214 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 SENP8Q96LD8 212 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 PAXXQ9BUH6 204 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 TSSK1BQ9BXA7 367 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 MIEF1Q9NQG6 463 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 AIPL1Q9NZN9 384 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 WDR45Q9Y484 360 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 MAD1L1Q9Y6D9 718 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 COL2A1P02458 1487 aaPredicted RBP4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 SNAPC4Q5SXM2 1469 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 SYNJ1O43426 1573 aa4.09□□□□□ -1.75
CKS1BP1-201ENST00000555221 ARHGEF11O15085 1522 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 MAGEB3O15480 346 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 GMFGO60234 142 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 TM7SF2O76062 418 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 RHOBTB1O94844 696 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 KIAA0754O94854 1291 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 ADCY5O95622 1261 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 PGCP20142 388 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 TPSB2P20231 275 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 IL2RGP31785 369 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 CA8P35219 290 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 MDH2P40926 338 aaKnown RBP4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 DPYSL3Q14195 570 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 TPSAB1Q15661 275 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 NDUFA9Q16795 377 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 ANKDD1AQ495B1 522 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms