RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 DNAJB14Q8TBM8 379 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ATG4AQ8WYN0 398 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ALG3Q92685 438 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 EME1Q96AY2 570 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM45BQ96B21 275 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 EXOSC8Q96B26 276 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 KLHL29Q96CT2 875 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 MEGF10Q96KG7 1140 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 DUX5Q96PT3 197 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 KLF6Q99612 283 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 OMDQ99983 421 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 MAPKAP1Q9BPZ7 522 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ZSWIM1Q9BR11 485 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PIGQQ9BRB3 760 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM43Q9BTV4 400 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ALG12Q9BV10 488 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF717Q9BY31 904 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ANGPTL4Q9BY76 406 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CIPCQ9C0C6 399 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CTDSP1Q9GZU7 261 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CLPBQ9H078 707 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM168Q9H0V1 697 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PIGUQ9H490 435 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 C10orf88Q9H8K7 445 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 LRRC4Q9HBW1 653 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PLK2Q9NYY3 685 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 OR6C3Q9NZP0 311 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 APOBEC3BQ9UH17 382 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 IL17BQ9UHF5 180 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 RASD1Q9Y272 281 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PKP3Q9Y446 797 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 URGCP-MRPS24S4R325 110 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ELOA3CA0A087WX78 387 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 A0A1W2PPM1 405 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 A0A1W2PQC6 194 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FAM149AA5PLN7 773 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 AGAP5A6NIR3 686 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FAM90A7PA6NKC0 464 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SH2D7A6NKC9 451 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ELOA3DA6NLF2 546 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF729A6NN14 1252 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 A6NNC1 897 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ARHGEF33A8MVX0 844 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FAM90A22PA8MWA6 464 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FAM90A12PA8MX19 464 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FAM90A23PA8MXZ1 464 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 K7ESM1 405 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 M0QYT0 321 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 BET1O15155 118 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ARPC5O15511 151 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 OGG1O15527 345 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CNOT3O75175 753 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 BCAS1O75363 584 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CSO75390 466 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 LRCH4O75427 683 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 RBMXL2O75526 392 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ZMPSTE24O75844 475 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SIX3O95343 332 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ANP32DO95626 131 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 LY86O95711 162 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ABHD16AO95870 558 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TRUB2O95900 331 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PRNPP04156 253 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PRKCGP05129 697 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 F7P08709 466 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ALPIP09923 528 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CBSLP0DN79 551 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 LYL1P12980 280 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CTPS1P17812 591 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 MMP8P22894 467 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CD40P25942 277 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ARNTP27540 789 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 IL1R2P27930 398 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ELK4P28324 431 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CBSP35520 551 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 NSFP46459 744 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 COMPP49747 757 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 EIF2B2P49770 351 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CAMPP49913 170 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PSMD4P55036 377 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 RPS21P63220 83 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CXADRP78310 365 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CSNK1G2P78368 415 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 IL9RQ01113 521 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 NAAAQ02083 359 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 RBPJQ06330 500 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CKAP4Q07065 602 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FGL1Q08830 312 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 BNIP3Q12983 259 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SLAMF1Q13291 335 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ITGADQ13349 1161 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FZD2Q14332 565 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ITIH4Q14624 930 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ADRM1Q16186 407 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TRIM16LQ309B1 348 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ELOA3BQ3SY89 546 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM52BQ4KMG9 183 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF766Q5HY98 468 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PAPD7Q5XG87 772 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM211Q6ICI0 200 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms