RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 SIRT3Q9NTG7 399 aaPredicted RBP7.02□□□□□ -1.29
ABCD4-220ENST00000553998 BCAP29Q9UHQ4 241 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 CNOT11Q9UKZ1 510 aaKnown RBP7.02□□□□□ -1.29
ABCD4-220ENST00000553998 BOKQ9UMX3 212 aaPredicted RBP7.02□□□□□ -1.29
ABCD4-220ENST00000553998 ARL2BPQ9Y2Y0 163 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 CHCHD2Q9Y6H1 151 aaPredicted RBP7.02□□□□□ -1.29
ABCD4-220ENST00000553998 RTTNQ86VV8 2226 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 A0A1W2PP18 115 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 SH3D21A4FU49 640 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 FRG2CA6NGY1 282 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 CCDC154A6NI56 674 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 DEFB108AA8MXU0 73 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 C9JVG2 144 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 RFXANKO14593 260 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 SMAD7O15105 426 aaKnown RBP7.01□□□□□ -1.29
ABCD4-220ENST00000553998 TO15178 435 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 FBXO45P0C2W1 286 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 ZCCHC18P0CG32 403 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 NAGAP17050 411 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 DRD5P21918 477 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 UQCRC2P22695 453 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 CCT3P49368 545 aaKnown RBP7.01□□□□□ -1.29
ABCD4-220ENST00000553998 PRIM2P49643 509 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 EMDP50402 254 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 SF3A3Q12874 501 aaKnown RBP eCLIP7.01□□□□□ -1.291e-7■■■□□ 17
ABCD4-220ENST00000553998 KLF10Q13118 480 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 CAPRIN1Q14444 709 aaKnown RBP7.01□□□□□ -1.29
ABCD4-220ENST00000553998 EXOSC7Q15024 291 aaKnown RBP7.01□□□□□ -1.29
ABCD4-220ENST00000553998 POU4F3Q15319 338 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 ZNHIT3Q15649 155 aaPredicted RBP7.01□□□□□ -1.29
ABCD4-220ENST00000553998 TIGD2Q4W5G0 525 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 COQ5Q5HYK3 327 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 TBCELQ5QJ74 424 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 GKAP1Q5VSY0 366 aaPredicted RBP7.01□□□□□ -1.29
ABCD4-220ENST00000553998 ADGRE4PQ86SQ3 457 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 PHC2Q8IXK0 858 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 CLECL1Q8IZS7 167 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 TAGAPQ8N103 731 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 ANKS4BQ8N8V4 417 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 CDRT4Q8N9R6 151 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 NUP43Q8NFH3 380 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 DOK4Q8TEW6 326 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 HOXB13Q92826 284 aaPredicted RBP7.01□□□□□ -1.29
ABCD4-220ENST00000553998 ADIPOR1Q96A54 375 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 SPACA9Q96E40 222 aaPredicted RBP7.01□□□□□ -1.29
ABCD4-220ENST00000553998 SPDL1Q96EA4 605 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 FAM120BQ96EK7 910 aaKnown RBP7.01□□□□□ -1.29
ABCD4-220ENST00000553998 WDYHV1Q96HA8 205 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 ZFP3Q96NJ6 502 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 BTBD9Q96Q07 612 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 PANX1Q96RD7 426 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 GAL3ST4Q96RP7 486 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 LMF2Q9BU23 707 aaKnown RBP7.01□□□□□ -1.29
ABCD4-220ENST00000553998 SFXN3Q9BWM7 321 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 RBM24Q9BX46 236 aaKnown RBP7.01□□□□□ -1.29
ABCD4-220ENST00000553998 ITPAQ9BY32 194 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 CXorf36Q9H7Y0 433 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 SLC52A3Q9NQ40 469 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 SERHLQ9NQF3 203 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 ZCCHC3Q9NUD5 404 aaKnown RBP7.01□□□□□ -1.29
ABCD4-220ENST00000553998 GIN1Q9NXP7 522 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 CCDC167Q9P0B6 97 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 LEF1Q9UJU2 399 aaPredicted RBP7.01□□□□□ -1.29
ABCD4-220ENST00000553998 GPR55Q9Y2T6 319 aaPredicted RBP7.01□□□□□ -1.29
ABCD4-220ENST00000553998 TESMINQ9Y4I5 508 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 SNX8Q9Y5X2 465 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 CAPN7Q9Y6W3 813 aa7.01□□□□□ -1.29
ABCD4-220ENST00000553998 SVEP1Q4LDE5 3571 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 GIMAP1-GIMAP5A0A087WTJ2 511 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 C15orf38-AP3S2A0A0A6YYH1 394 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 RNF103-CHMP3A0A140T963 221 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 DUXAA6NLW8 204 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 RNF212BA8MTL3 300 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 BBIP1A8MTZ0 92 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 CAPN14A8MX76 684 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 A8MXE2 369 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 NR5A2O00482 541 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 CASKO14936 926 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 ANGPT2O15123 496 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 SIAH2O43255 324 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 TMCC2O75069 709 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 ERN1O75460 977 aaKnown RBP7□□□□□ -1.29
ABCD4-220ENST00000553998 DCTN3O75935 186 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 RCBTB2O95199 551 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 CNOT4O95628 575 aaKnown RBP7□□□□□ -1.29
ABCD4-220ENST00000553998 CPSF4O95639 269 aaKnown RBP7□□□□□ -1.29
ABCD4-220ENST00000553998 KRT75O95678 551 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 F12P00748 615 aaPredicted RBP7□□□□□ -1.29
ABCD4-220ENST00000553998 ABCB1P08183 1280 aaPredicted RBP7□□□□□ -1.29
ABCD4-220ENST00000553998 EFNA1P20827 205 aaPredicted RBP7□□□□□ -1.29
ABCD4-220ENST00000553998 SOAT1P35610 550 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 MAP3K8P41279 467 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 TMED10P49755 219 aaKnown RBP7□□□□□ -1.29
ABCD4-220ENST00000553998 ANXA11P50995 505 aaKnown RBP7□□□□□ -1.29
ABCD4-220ENST00000553998 AGFG1P52594 562 aaKnown RBP7□□□□□ -1.29
ABCD4-220ENST00000553998 PRKAG1P54619 331 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 NRG3P56975 720 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 KCNJ2P63252 427 aa7□□□□□ -1.29
ABCD4-220ENST00000553998 EEF1A1P68104 462 aaKnown RBP7□□□□□ -1.29
ABCD4-220ENST00000553998 PSG6Q00889 435 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms