RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 TRDV1A0A1B0GX56 115 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 A0A1W2PPL8 197 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 A0A1W2PS29 197 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 ANHXE9PGG2 379 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 F8W036 122 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 H3BN98 237 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 GTPBP1O00178 669 aaKnown RBP11.44□□□□□ -0.58
SHMT2-207ENST00000553837 SNAPINO95295 136 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 MPC2O95563 127 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 PROS1P07225 676 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 BCL6P41182 706 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 XKP51811 444 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 FABP5Q01469 135 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 DUSP2Q05923 314 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 PUDPQ08623 228 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 DSG2Q14126 1118 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 ZNF750Q32MQ0 723 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 FAM46CQ5VWP2 391 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 ADCK2Q7Z695 626 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 NUDT13Q86X67 352 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 FAM26EQ8N5C1 309 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 SYT14Q8NB59 555 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 OR6C4Q8NGE1 309 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 CEP76Q8TAP6 659 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 PCNPQ8WW12 178 aaKnown RBP11.44□□□□□ -0.58
SHMT2-207ENST00000553837 RGMAQ96B86 450 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 SGK3Q96BR1 496 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 KXD1Q9BQD3 176 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 PELOQ9BRX2 385 aaKnown RBP11.44□□□□□ -0.58
SHMT2-207ENST00000553837 RPP25Q9BUL9 199 aaKnown RBP11.44□□□□□ -0.58
SHMT2-207ENST00000553837 SHARPINQ9H0F6 387 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 OR51J1Q9H342 316 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 GLIPR2Q9H4G4 154 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 DDX31Q9H8H2 851 aaKnown RBP11.44□□□□□ -0.58
SHMT2-207ENST00000553837 SFXN1Q9H9B4 322 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 SLCO1C1Q9NYB5 712 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 YARS2Q9Y2Z4 477 aaKnown RBP11.44□□□□□ -0.58
SHMT2-207ENST00000553837 hCG_1807616A0A1W2PRN6 198 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 LRIT2A6NDA9 550 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 FAM170BA6NMN3 283 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 C5orf58C9J3I9 102 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 RPN2P04844 631 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 CEACAM5P06731 702 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 OR12D1P0DN82 309 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 GAAP10253 952 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 ALPPL2P10696 532 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 HSD17B2P37059 387 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 NUP62P37198 522 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-207ENST00000553837 PRDX1Q06830 199 aaKnown RBP11.44□□□□□ -0.58
SHMT2-207ENST00000553837 SPDYE7PQ495Y7 208 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 HSD17B12Q53GQ0 312 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 C9orf50Q5SZB4 431 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 OR4C11Q6IEV9 310 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 KIAA1211LQ6NV74 962 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 CD200R1LQ6Q8B3 271 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 RIT1Q92963 219 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 SENP5Q96HI0 755 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-207ENST00000553837 C12orf57Q99622 126 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 PCBD2Q9H0N5 130 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 SLC6A20Q9NP91 592 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 GDE1Q9NZC3 331 aa11.44□□□□□ -0.58
SHMT2-207ENST00000553837 TESQ9UGI8 421 aaKnown RBP11.44□□□□□ -0.58
SHMT2-207ENST00000553837 GOLGA4Q13439 2230 aaKnown RBP11.43□□□□□ -0.58
SHMT2-207ENST00000553837 TMEM129A0AVI4 362 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 IRGMA1A4Y4 181 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 PRR19A6NJB7 356 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 HRO43593 1189 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 PEX14O75381 377 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 EPPINO95925 133 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 ELAVL4P26378 380 aaKnown RBP11.43□□□□□ -0.58
SHMT2-207ENST00000553837 PEBP1P30086 187 aaKnown RBP11.43□□□□□ -0.58
SHMT2-207ENST00000553837 KCNJ5P48544 419 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 SEC13P55735 322 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 LSM11P83369 360 aaKnown RBP eCLIP11.43□□□□□ -0.58
SHMT2-207ENST00000553837 CAMK2DQ13557 499 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 ENPP2Q13822 863 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 AGERQ15109 404 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 SLC25A30Q5SVS4 291 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 CFAP77Q6ZQR2 320 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 BCDIN3DQ7Z5W3 292 aaKnown RBP11.43□□□□□ -0.58
SHMT2-207ENST00000553837 SLC30A8Q8IWU4 369 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 MS4A15Q8N5U1 240 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 GATAD2BQ8WXI9 593 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 ACOT12Q8WYK0 555 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 SLC9A6Q92581 669 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 RFT1Q96AA3 541 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 AMDHD1Q96NU7 426 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 TREX2Q9BQ50 279 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-207ENST00000553837 THAP7Q9BT49 309 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-207ENST00000553837 BTBD1Q9H0C5 482 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 ABCG5Q9H222 651 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 IGFLR1Q9H665 355 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 KCNK12Q9HB15 430 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 NEUROD4Q9HD90 331 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 OBP2AQ9NY56 170 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 YBX2Q9Y2T7 364 aaKnown RBP11.43□□□□□ -0.58
SHMT2-207ENST00000553837 CKAP5Q14008 2032 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 TRAV6A0A075B6T7 132 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 PGRMC2O15173 223 aa11.43□□□□□ -0.58
SHMT2-207ENST00000553837 TLX2O43763 284 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms