RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 OR2M5A3KFT3 312 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 NKX2-6A6NCS4 301 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 GSNP06396 782 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 OR12D1P0DN82 309 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 MSX1P28360 303 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 CEACAM8P31997 349 aaPredicted RBP18.42■□□□□ 0.54
FOXA1-203ENST00000553751 TIMP3P35625 211 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 KHKP50053 298 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 RNF144AP50876 292 aaPredicted RBP18.42■□□□□ 0.54
FOXA1-203ENST00000553751 POLR2JP52435 117 aaKnown RBP18.42■□□□□ 0.54
FOXA1-203ENST00000553751 ATP12AP54707 1039 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 ZNF117Q03924 483 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 TFF3Q07654 80 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 FUT5Q11128 374 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 ARHGAP11BQ3KRB8 267 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 GLYR1Q49A26 553 aaPredicted RBP18.42■□□□□ 0.54
FOXA1-203ENST00000553751 TIGD2Q4W5G0 525 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 OLIG3Q7RTU3 272 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 MTERF4Q7Z6M4 381 aaKnown RBP18.42■□□□□ 0.54
FOXA1-203ENST00000553751 LIX1LQ8IVB5 337 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 RAB8BQ92930 207 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 SH3YL1Q96HL8 342 aaPredicted RBP18.42■□□□□ 0.54
FOXA1-203ENST00000553751 KLHDC3Q9BQ90 382 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 PIGQQ9BRB3 760 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 NMUR2Q9GZQ4 415 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 CALHM2Q9HA72 323 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 SLC6A13Q9NSD5 602 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 EXD2Q9NVH0 621 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 VDAC3Q9Y277 283 aa18.42■□□□□ 0.54
FOXA1-203ENST00000553751 MBD3L4A6NDZ8 208 aaPredicted RBP18.41■□□□□ 0.54
FOXA1-203ENST00000553751 MBD3L3A6NE82 208 aaPredicted RBP18.41■□□□□ 0.54
FOXA1-203ENST00000553751 MBD3L5A6NJ08 208 aaPredicted RBP18.41■□□□□ 0.54
FOXA1-203ENST00000553751 SHISA8B8ZZ34 492 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 OIP5O43482 229 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 FCMRO60667 390 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 TNFRSF21O75509 655 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 STX11O75558 287 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 AGR2O95994 175 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 POU3F2P20265 443 aaPredicted RBP18.41■□□□□ 0.54
FOXA1-203ENST00000553751 RCAN2Q14206 197 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 BCL2A1Q16548 175 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 DNAJC14Q6Y2X3 702 aaPredicted RBP18.41■□□□□ 0.54
FOXA1-203ENST00000553751 MSANTD1Q6ZTZ1 278 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 C16orf62Q7Z3J2 963 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 RNF130Q86XS8 419 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 ACBD4Q8NC06 268 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 MBD3L2Q8NHZ7 208 aaPredicted RBP18.41■□□□□ 0.54
FOXA1-203ENST00000553751 VPS33AQ96AX1 596 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 KCNE5Q9UJ90 142 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 ZNF337Q9Y3M9 751 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 DTNAQ9Y4J8 743 aa18.41■□□□□ 0.54
FOXA1-203ENST00000553751 PKDREJQ9NTG1 2253 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 A0A087WZY1 265 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 CENPVL1A0A0U1RR11 272 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 FAM234BA2RU67 622 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 CLCA1A8K7I4 914 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 HSPB2A8KAH6 182 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 LINC01387J3KSC0 135 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 HMGN4O00479 90 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 RFXANKO14593 260 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 HNRNPRO43390 633 aaKnown RBP18.4■□□□□ 0.54
FOXA1-203ENST00000553751 HCRTR2O43614 444 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 KIAA0513O60268 411 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 EDF1O60869 148 aaKnown RBP18.4■□□□□ 0.54
FOXA1-203ENST00000553751 PEPDP12955 493 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 ZNF17P17021 662 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 STX1BP61266 288 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 HSPB2Q16082 182 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 ZNF621Q6ZSS3 439 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 C9orf106Q8NAJ2 232 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 B4GALNT2Q8NHY0 566 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 PHOSPHO1Q8TCT1 267 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 XAGE5Q8WWM1 108 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 STON2Q8WXE9 905 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 MARVELD3Q96A59 401 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 UCN2Q96RP3 112 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 NPAS1Q99742 590 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 KCNJ16Q9NPI9 418 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 NPDC1Q9NQX5 325 aaPredicted RBP18.4■□□□□ 0.54
FOXA1-203ENST00000553751 MED17Q9NVC6 651 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 CLCF1Q9UBD9 225 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 MKLN1Q9UL63 735 aa18.4■□□□□ 0.54
FOXA1-203ENST00000553751 PRAMEF27A3QJZ7 478 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 C7orf72A4D263 438 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 H3BML4 177 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 H3BNH8 94 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 UGT2B17O75795 530 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 GUSBP08236 651 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 ZNF41P51814 821 aaPredicted RBP18.39■□□□□ 0.53
FOXA1-203ENST00000553751 CLDN15P56746 228 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 GPR68Q15743 365 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 ZNF141Q15928 474 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 PLPPR5Q32ZL2 321 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 SLC25A35Q3KQZ1 300 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 PDZK1Q5T2W1 519 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 ATAD3BQ5T9A4 648 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 TYW3Q6IPR3 259 aaKnown RBP18.39■□□□□ 0.53
FOXA1-203ENST00000553751 POMZP3Q6PJE2 187 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 CBLN3Q6UW01 205 aa18.39■□□□□ 0.53
FOXA1-203ENST00000553751 PLXDC2Q6UX71 529 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms