RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 DUSP2Q05923 314 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF155Q12901 538 aaPredicted RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 GAB1Q13480 694 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 DNASE1L3Q13609 305 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 EXOSC7Q15024 291 aaKnown RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 LARS2Q15031 903 aaKnown RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 NCF4Q15080 339 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 TESK1Q15569 626 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 LTB4RQ15722 352 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 ADRM1Q16186 407 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 EMC4Q5J8M3 183 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 AP1ARQ63HQ0 302 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 VASNQ6EMK4 673 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 FAAH2Q6GMR7 532 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 HEPHL1Q6MZM0 1159 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 PAPD4Q6PIY7 484 aaKnown RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 HSDL2Q6YN16 418 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 NDUFAF7Q7L592 441 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 GPR155Q7Z3F1 870 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 PTOV1Q86YD1 416 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 ARMC8Q8IUR7 673 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 SLC44A2Q8IWA5 706 aaPredicted RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 TAGAPQ8N103 731 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 CLEC4FQ8N1N0 589 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 SLC15A4Q8N697 577 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF615Q8N8J6 731 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 ENDOVQ8N8Q3 282 aaKnown RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF527Q8NB42 609 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 SLC16A11Q8NCK7 471 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 FAM156AQ8NDB6 213 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 CHDHQ8NE62 594 aaPredicted RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 CATSPER1Q8NEC5 780 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 C17orf47Q8NEP4 570 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 NFKBIDQ8NI38 313 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 NUBPLQ8TB37 319 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF721Q8TF20 911 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 SLC38A5Q8WUX1 472 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 WDR60Q8WVS4 1066 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 NR4A3Q92570 626 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 PROX1Q92786 737 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 HOXB13Q92826 284 aaPredicted RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 RAB8BQ92930 207 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 TSLPQ969D9 159 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 GIMAP5Q96F15 307 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 C16orf58Q96GQ5 468 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 TMEM19Q96HH6 336 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF347Q96SE7 839 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 SDF2Q99470 211 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 DOHHQ9BU89 302 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 DEFB126Q9BYW3 111 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 SEMA4CQ9C0C4 833 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF700Q9H0M5 742 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 VCX3BQ9H321 246 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 IKZF5Q9H5V7 419 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 FOLH1BQ9HBA9 442 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 S100A14Q9HCY8 104 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 EQTNQ9NQ60 294 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 ARMC1Q9NVT9 282 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 C6orf203Q9P0P8 240 aaPredicted RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 STX18Q9P2W9 335 aaKnown RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 CTSFQ9UBX1 484 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 SEC14L3Q9UDX4 400 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 CBLCQ9ULV8 474 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 PPIEQ9UNP9 301 aaKnown RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 AURKCQ9UQB9 309 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 FAM32AQ9Y421 112 aaKnown RBP4.63□□□□□ -1.67
VTI1B-202ENST00000553619 WDR45Q9Y484 360 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 PCDHGA6Q9Y5G7 932 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 CLDN16Q9Y5I7 305 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 NINQ8N4C6 2090 aa4.63□□□□□ -1.67
VTI1B-202ENST00000553619 XIRP2A4UGR9 3374 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 COL27A1Q8IZC6 1860 aaPredicted RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 PTPRBP23467 1997 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 FER1L5A0AVI2 2057 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 A0A1W2PS29 197 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 TCRBV5S2A0A599 114 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 OR2W5A6NFC9 320 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 FRG2CA6NGY1 282 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 A8MVJ9 347 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 CDRT15L2A8MXV6 281 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 H3BNH8 94 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 TO15178 435 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 ENTPD5O75356 428 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 REM1O75628 298 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 KLF7O75840 302 aaPredicted RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 SORBS2O94875 1100 aaKnown RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 H6PDO95479 791 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 ATP6V1G2O95670 118 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF682O95780 498 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 DDAH2O95865 285 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 HPP00738 406 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 IGKV3-11P04433 115 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 DBIP07108 87 aaKnown RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 PABPC4LP0CB38 370 aaKnown RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 ACP2P11117 423 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 LIPCP11150 499 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 HPGDP15428 266 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 NCK1P16333 377 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 PIGAP37287 484 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms