RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TSACCQ96A04 125 aaPredicted RBP12□□□□□ -0.49
SHMT2-205ENST00000553474 KATNB1Q9BVA0 655 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 GSDMCQ9BYG8 508 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 KCNN2Q9H2S1 579 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 TNFRSF10DQ9UBN6 386 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 TBC1D24Q9ULP9 559 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 CBLCQ9ULV8 474 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 CLCA2Q9UQC9 943 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 CARD8Q9Y2G2 431 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 A0A1W2PQL4 384 aaPredicted RBP12□□□□□ -0.49
SHMT2-205ENST00000553474 OR6C74A6NCV1 312 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 FAM86C2PA6NEL3 165 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 C10orf142B7Z368 130 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 H0YGG7 62 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 CYR61O00622 381 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 BRINP1O60477 761 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 GALR3O60755 368 aaPredicted RBP12□□□□□ -0.49
SHMT2-205ENST00000553474 TNFP01375 233 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 IL7P13232 177 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 POLR2CP19387 275 aaPredicted RBP12□□□□□ -0.49
SHMT2-205ENST00000553474 GPR4P46093 362 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 RPS5P46782 204 aaKnown RBP12□□□□□ -0.49
SHMT2-205ENST00000553474 CTBP2P56545 445 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 ARF3P61204 181 aaPredicted RBP12□□□□□ -0.49
SHMT2-205ENST00000553474 SKP1P63208 163 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 TRAM1Q15629 374 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 GPR68Q15743 365 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 ALG11Q2TAA5 492 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 PRICKLE4Q2TBC4 344 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 CXXC5Q7LFL8 322 aaKnown RBP12□□□□□ -0.49
SHMT2-205ENST00000553474 GRAMD2AQ8IUY3 354 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 ARIH2OSQ8N7S6 290 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 TMEM239Q8WW34 195 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 CTHRC1Q96CG8 243 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 LRFN5Q96NI6 719 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 PRSS27Q9BQR3 290 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 ZNF559Q9BR84 538 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 PRR14Q9BWN1 585 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 FOXQ1Q9C009 403 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 UBQLN3Q9H347 655 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 TPK1Q9H3S4 243 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 C6orf106Q9H6K1 298 aaPredicted RBP12□□□□□ -0.49
SHMT2-205ENST00000553474 INIPQ9NRY2 104 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 SIDT1Q9NXL6 827 aaKnown RBP12□□□□□ -0.49
SHMT2-205ENST00000553474 WNT16Q9UBV4 365 aa12□□□□□ -0.49
SHMT2-205ENST00000553474 ZNF223Q9UK11 482 aaPredicted RBP12□□□□□ -0.49
SHMT2-205ENST00000553474 FABP12A6NFH5 140 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 SLC22A31A6NKX4 558 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 J3QRE1 110 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 GLULP15104 373 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 ACSL1P33121 698 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 SOX18P35713 384 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 ATP6V1E1P36543 226 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 CASP3P42574 277 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 TPMTP51580 245 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 RPS25P62851 125 aaKnown RBP11.99□□□□□ -0.49
SHMT2-205ENST00000553474 UBE2IP63279 158 aaKnown RBP11.99□□□□□ -0.49
SHMT2-205ENST00000553474 POU6F2P78424 691 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-205ENST00000553474 ZXDAP98168 799 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 CD300CQ08708 224 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 MAP4K2Q12851 820 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 RIN1Q13671 783 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 TRMT12Q53H54 448 aaKnown RBP11.99□□□□□ -0.49
SHMT2-205ENST00000553474 PDZK1Q5T2W1 519 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 MRPL2Q5T653 305 aaKnown RBP11.99□□□□□ -0.49
SHMT2-205ENST00000553474 MZT2AQ6P582 158 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 FAM131AQ6UXB0 335 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 OOSP2Q86WS3 158 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 ACBD7Q8N6N7 88 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 CCL4L1Q8NHW4 92 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 FANK1Q8TC84 345 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 DNAJA4Q8WW22 397 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-205ENST00000553474 ACOT12Q8WYK0 555 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 MSANTD3Q96H12 275 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 DIRAS2Q96HU8 199 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 SECISBP2Q96T21 854 aaKnown RBP11.99□□□□□ -0.49
SHMT2-205ENST00000553474 ZNF649Q9BS31 505 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 SLC22A4Q9H015 551 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 OR52D1Q9H346 318 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 TBC1D17Q9HA65 648 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 ABCB9Q9NP78 766 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 ADAP2Q9NPF8 381 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 CPNE7Q9UBL6 633 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 ADAM30Q9UKF2 790 aa11.99□□□□□ -0.49
SHMT2-205ENST00000553474 PRAMEF26H0Y7S4 382 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 H0Y8X5 98 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 BHLHE40O14503 412 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 SCAMP1O15126 338 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 HCN1O60741 890 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 NKX2-2O95096 273 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 HLA-DQB1P01920 261 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 SLC35E2P0CK97 266 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 NUDT1P36639 197 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 RBM34P42696 430 aaKnown RBP11.98□□□□□ -0.49
SHMT2-205ENST00000553474 RAB38P57729 211 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 OR2B6P58173 313 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 FABP5Q01469 135 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 MXD1Q05195 221 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 ZNF155Q12901 538 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-205ENST00000553474 OR1Q1Q15612 314 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms