RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 GALNT18Q6P9A2 607 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 GPRIN3Q6ZVF9 776 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.06□□□□□ -1.12
SYNE2-209ENST00000553308 ZAR1Q86SH2 424 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 OR10H5Q8NGA6 315 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 METTL6Q8TCB7 284 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 HSD17B8Q92506 261 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 HTRA1Q92743 480 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 ZBTB8AQ96BR9 441 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 ELP4Q96EB1 424 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 SH3YL1Q96HL8 342 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-209ENST00000553308 KLHL15Q96M94 604 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 AMDHD1Q96NU7 426 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 TMEM237Q96Q45 408 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 TNFRSF13CQ96RJ3 184 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 KCNA7Q96RP8 456 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 ZNF382Q96SR6 550 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 KCNK17Q96T54 332 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 MRPL57Q9BQC6 102 aaKnown RBP8.06□□□□□ -1.12
SYNE2-209ENST00000553308 BEX2Q9BXY8 128 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 SHCBP1LQ9BZQ2 653 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 AMBRA1Q9C0C7 1298 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 RAB17Q9H0T7 212 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 ACSS3Q9H6R3 686 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 MIEF1Q9NQG6 463 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 CISD1Q9NZ45 108 aaKnown RBP8.06□□□□□ -1.12
SYNE2-209ENST00000553308 KLHL13Q9P2N7 655 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 NFU1Q9UMS0 254 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 TIMM22Q9Y584 194 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 SNX8Q9Y5X2 465 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 ESYT3A0FGR9 886 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 ZNF814B7Z6K7 855 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 LYZL6O75951 148 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 INHBAP08476 426 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 COL6A2P12110 1019 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 GSTM5P46439 218 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 CARD18P57730 90 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 VLDLRP98155 873 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 FOXF1Q12946 379 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 HSPB3Q12988 150 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 SLC29A2Q14542 456 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 RNPS1Q15287 305 aaKnown RBP8.05□□□□□ -1.12
SYNE2-209ENST00000553308 CD226Q15762 336 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 STK11Q15831 433 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 NRF1Q16656 503 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 GLE1Q53GS7 698 aaKnown RBP8.05□□□□□ -1.12
SYNE2-209ENST00000553308 ZNF678Q5SXM1 525 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 TEX35Q5T0J7 233 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 PDSS1Q5T2R2 415 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 CPTPQ5TA50 214 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 GTF2IRD2BQ6EKJ0 949 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 FAM71E1Q6IPT2 247 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 BHLHA15Q7RTS1 189 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-209ENST00000553308 ZNF551Q7Z340 670 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-209ENST00000553308 GTF2IRD2Q86UP8 949 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 TRABD2AQ86V40 505 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 LILRA2Q8N149 483 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 ZNF525Q8N782 197 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 ARIH2OSQ8N7S6 290 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 FBXO30Q8TB52 745 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 GPR151Q8TDV0 419 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 ACTRT2Q8TDY3 377 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 REXO5Q96IC2 774 aaKnown RBP8.05□□□□□ -1.12
SYNE2-209ENST00000553308 PAFAH2Q99487 392 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 CACNG6Q9BXT2 260 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 GRIP2Q9C0E4 1043 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 MANSC1Q9H8J5 431 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 C3orf14Q9HBI5 128 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 FAIMQ9NVQ4 179 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 TMEM160Q9NX00 188 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 TAS2R7Q9NYW3 318 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 NINJ2Q9NZG7 142 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 NPAP1Q9NZP6 1156 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 PRSS50Q9UI38 385 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 GRID1Q9ULK0 1009 aa8.05□□□□□ -1.12
SYNE2-209ENST00000553308 POLR3HQ9Y535 204 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-209ENST00000553308 FREM1Q5H8C1 2179 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 IGHV3-15A0A0B4J1V0 119 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 ELOA3DA6NLF2 546 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-209ENST00000553308 TRIM49D1C9J1S8 452 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 ABCD4O14678 606 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 EFNA2O43921 213 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 DLX3O60479 287 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 NKX2-2O95096 273 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 FESP07332 822 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 NGFRP08138 427 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 LINGO3P0C6S8 592 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 PABPC4LP0CB38 370 aaKnown RBP8.04□□□□□ -1.12
SYNE2-209ENST00000553308 IGHV4-31P0DP07 118 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 ACP2P11117 423 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 EDNRAP25101 427 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 PHBP35232 272 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 MAP3K8P41279 467 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 PRIM2P49643 509 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 MANFP55145 182 aaKnown RBP8.04□□□□□ -1.12
SYNE2-209ENST00000553308 LOXL1Q08397 574 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-209ENST00000553308 SPOCK1Q08629 439 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 ITGADQ13349 1161 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 P2RY6Q15077 328 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 PPA1Q15181 289 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms