RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 LRRC75AQ8NAA5 344 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 ACVR1CQ8NER5 493 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 NUBPLQ8TB37 319 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 RNF128Q8TEB7 428 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 FAM131CQ96AQ9 280 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 TMEM18Q96B42 140 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 OTUB2Q96DC9 234 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 DUS3LQ96G46 650 aaKnown RBP3.76□□□□□ -1.81
USP44-208ENST00000552440 CCDC3Q9BQI4 270 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 DGCR6LQ9BY27 220 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 RNF121Q9H920 327 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 IMP3Q9NV31 184 aaKnown RBP3.76□□□□□ -1.81
USP44-208ENST00000552440 ASB6Q9NWX5 421 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 MIOSQ9NXC5 875 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 PLEK2Q9NYT0 353 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 MYEF2Q9P2K5 600 aaKnown RBP3.76□□□□□ -1.81
USP44-208ENST00000552440 MRM2Q9UI43 246 aaKnown RBP3.76□□□□□ -1.81
USP44-208ENST00000552440 KLHDC2Q9Y2U9 406 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 URGCP-MRPS24S4R325 110 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 AFF2P51816 1311 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 TSPOAP1O95153 1857 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 TEX14Q8IWB6 1497 aa3.76□□□□□ -1.81
USP44-208ENST00000552440 A0A1W2PP11 408 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 CLEC18AA5D8T8 446 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 SHISA7A6NL88 538 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 KLRC4-KLRK1H3BQV0 150 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 SMLR1H3BR10 107 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 CCL24O00175 119 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 OR7A17O14581 309 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 RFXANKO14593 260 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 ARPC2O15144 300 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 TOX3O15405 576 aaPredicted RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 GPR137BO60478 399 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 GMDSO60547 372 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 N4BP1O75113 896 aaKnown RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 VAPBO95292 243 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 FADS2O95864 444 aaKnown RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 DCNP07585 359 aaKnown RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 CD59P13987 128 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 PRF1P14222 555 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 MAGP20916 626 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 GIFP27352 417 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 CD1CP29017 333 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 HOXA7P31268 230 aaPredicted RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 SFTPDP35247 375 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 MATKP42679 507 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 SLC1A2P43004 574 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 MRPL19P49406 292 aaKnown RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 TUFMP49411 452 aaKnown RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 DUSP3P51452 185 aaPredicted RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 NOVA1P51513 510 aaKnown RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 UCNP55089 124 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 EWSR1Q01844 656 aaKnown RBP eCLIP3.75□□□□□ -1.81
USP44-208ENST00000552440 GLO1Q04760 184 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 SRYQ05066 204 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 C1orf61Q13536 156 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 CYTH1Q15438 398 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 OR1C1Q15619 314 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 SGCAQ16586 387 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 MOGQ16653 247 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 ZNF699Q32M78 642 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 C5orf47Q569G3 176 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 ZNF776Q68DI1 518 aaPredicted RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 OR4A47Q6IF82 309 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 KCTD18Q6PI47 426 aaPredicted RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 TTC33Q6PID6 262 aaPredicted RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 CLEC18BQ6UXF7 455 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 GCNT7Q6ZNI0 430 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 C19orf35Q6ZS72 473 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 RANBP3LQ86VV4 465 aaPredicted RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 TRIM69Q86WT6 500 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 CLEC18CQ8NCF0 446 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 ADAD2Q8NCV1 583 aaKnown RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 PPFIBP2Q8ND30 876 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 OR13J1Q8NGT2 312 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 PDLIM2Q96JY6 352 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 SLC38A1Q9H2H9 487 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 EGLN3Q9H6Z9 239 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 ACKR4Q9NPB9 350 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 MRPL40Q9NQ50 206 aaKnown RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 TECRQ9NZ01 308 aaKnown RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 STMN3Q9NZ72 180 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 APOBEC3BQ9UH17 382 aaKnown RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 SLC12A6Q9UHW9 1150 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 PLLPQ9Y342 182 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 OR1A2Q9Y585 309 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 USP16Q9Y5T5 823 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 FRMPD4Q14CM0 1322 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 MAP3K15Q6ZN16 1313 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 CNTNAP2Q9UHC6 1331 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 CCDC88BA6NC98 1476 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 TOP2AP11388 1531 aaKnown RBP3.75□□□□□ -1.81
USP44-208ENST00000552440 KAT6AQ92794 2004 aa3.75□□□□□ -1.81
USP44-208ENST00000552440 A0A1W2PNV4 684 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 PRSS37A4D1T9 235 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 LRP5LA4QPB2 252 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 SLCO1B7G3V0H7 640 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 MKRN2OSH3BPM6 223 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 LIN7AO14910 233 aaPredicted RBP3.74□□□□□ -1.81
USP44-208ENST00000552440 AIREO43918 545 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms