RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 PTNP21246 168 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 MAOAP21397 527 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 GPR3P46089 330 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 HSD17B7P56937 341 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 RAB40BQ12829 278 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 MINDY4Q4G0A6 757 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 C3orf38Q5JPI3 329 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 PAQR6Q6TCH4 344 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 GRAMD2AQ8IUY3 354 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 MFSD4AQ8N468 514 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 METTL27Q8N6F8 245 aaPredicted RBP12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 DNASE2BQ8WZ79 361 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 CLDN23Q96B33 292 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 RNFT2Q96EX2 444 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 ZNF578Q96N58 590 aaPredicted RBP12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 MMP27Q9H306 513 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 TBC1D17Q9HA65 648 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 TMEM27Q9HBJ8 222 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 MED17Q9NVC6 651 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 KLHL3Q9UH77 587 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 DTX4Q9Y2E6 619 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 EML5Q05BV3 1969 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 SPAG17Q6Q759 2223 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 MYL12BO14950 172 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 DSCR3O14972 297 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 PRAMEF2O60811 474 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 CH25HO95992 272 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 HBQ1P09105 142 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 BMP4P12644 408 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 ZNF12P17014 697 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 ENDOUP21128 410 aaKnown RBP12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 CD1CP29017 333 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 ETV5P41161 510 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 ETV1P50549 477 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 PRKCDQ05655 676 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 FUT7Q11130 342 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 ITGADQ13349 1161 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 TMED1Q13445 227 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 GRM7Q14831 915 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 ZNF404Q494X3 552 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 AADACL4Q5VUY2 407 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 ZNF613Q6PF04 617 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 NPSR1Q6W5P4 371 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 AMER2Q8N7J2 671 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 PFN4Q8NHR9 129 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 BRIX1Q8TDN6 353 aaKnown RBP12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 SAMD8Q96LT4 415 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 DPH1Q9BZG8 443 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 CCDC59Q9P031 241 aaKnown RBP12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 A3GALT2U3KPV4 340 aa12.97□□□□□ -0.33
RAB3IP-216ENST00000552199 STK25O00506 426 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 SOX1O00570 391 aaPredicted RBP12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 GPX5O75715 221 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 HMGN1P05114 100 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 IFI30P13284 250 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 MAKP20794 623 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 GALNSP34059 522 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 SOX3P41225 446 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 MTNR1AP48039 350 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 OR1D5P58170 312 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 MLLT11Q13015 90 aaPredicted RBP12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 C1DQ13901 141 aaKnown RBP12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 KCNAB1Q14722 419 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 ZNF141Q15928 474 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 INAQ16352 499 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 TMEM44Q2T9K0 475 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 AMZ1Q400G9 498 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 BTLAQ7Z6A9 289 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 ZNF614Q8N883 585 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 RCBTB1Q8NDN9 531 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 OR2T33Q8NG76 320 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 RNF217Q8TC41 542 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 AHCYL2Q96HN2 611 aaKnown RBP12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 CNPPD1Q9BV87 410 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 NXF2Q9GZY0 626 aaKnown RBP12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 UBQLN3Q9H347 655 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 SIDT1Q9NXL6 827 aaKnown RBP12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 ERVK-19Q9WJR5 959 aa12.96□□□□□ -0.33
RAB3IP-216ENST00000552199 ZGLP1P0C6A0 271 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 ACAA2P42765 397 aaKnown RBP12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 CXCL12P48061 93 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 PGDP52209 483 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 RPS3AP61247 264 aaKnown RBP12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 BIKQ13323 160 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 SERTAD2Q14140 314 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 C16orf52Q8NHV5 167 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 RFKQ969G6 155 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 HS6ST2Q96MM7 605 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 PELOQ9BRX2 385 aaKnown RBP12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 OR10A5Q9H207 317 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 OR52D1Q9H346 318 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 Q9N2J8 555 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 ATP13A2Q9NQ11 1180 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 C20orf141Q9NUB4 165 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 DNAJB12Q9NXW2 375 aaKnown RBP12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 FLRT3Q9NZU0 649 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 IL20RAQ9UHF4 553 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 TMEM5Q9Y2B1 443 aa12.96□□□□□ -0.34
RAB3IP-216ENST00000552199 CARD8Q9Y2G2 431 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms