RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 ZNF17P17021 662 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 DDX5P17844 614 aaKnown RBP10.86□□□□□ -0.67
SNRPF-204ENST00000552085 PRTN3P24158 256 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 OR3A2P47893 321 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 KHKP50053 298 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 MRPS22P82650 360 aaKnown RBP10.86□□□□□ -0.67
SNRPF-204ENST00000552085 RIN1Q13671 783 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 CT45A2Q5DJT8 189 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 ARL13AQ5H913 290 aaPredicted RBP10.86□□□□□ -0.67
SNRPF-204ENST00000552085 C1QL2Q7Z5L3 287 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 ZNF786Q8N393 782 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 OR51F2Q8NH61 342 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 UHMK1Q8TAS1 419 aaKnown RBP10.86□□□□□ -0.67
SNRPF-204ENST00000552085 DUSP19Q8WTR2 217 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 EFHD2Q96C19 240 aaPredicted RBP10.86□□□□□ -0.67
SNRPF-204ENST00000552085 MS4A14Q96JA4 679 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 RTN4RQ9BZR6 473 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 RAB1BQ9H0U4 201 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 SAYSD1Q9NPB0 183 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 NUDT4Q9NZJ9 180 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 OPTCQ9UBM4 332 aa10.86□□□□□ -0.67
SNRPF-204ENST00000552085 A0A1W2PR80 420 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 M0QZ24 198 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 PGRMC1O00264 195 aaKnown RBP10.85□□□□□ -0.67
SNRPF-204ENST00000552085 FOXE1O00358 373 aaPredicted RBP10.85□□□□□ -0.67
SNRPF-204ENST00000552085 FADS1O60427 444 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 RAD51DO75771 328 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 PRKD3O94806 890 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 SEMA3DO95025 777 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 IVDP26440 423 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 IDH3GP51553 393 aaPredicted RBP10.85□□□□□ -0.67
SNRPF-204ENST00000552085 CARD18P57730 90 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 CORO7P57737 925 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 RAC1P63000 192 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 DUSP2Q05923 314 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 RASGEF1BQ0VAM2 473 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 TSNAXIP1Q2TAA8 658 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 TRMT12Q53H54 448 aaKnown RBP10.85□□□□□ -0.67
SNRPF-204ENST00000552085 TCHHL1Q5QJ38 904 aaPredicted RBP10.85□□□□□ -0.67
SNRPF-204ENST00000552085 SH2D4BQ5SQS7 431 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 HP1BP3Q5SSJ5 553 aaPredicted RBP10.85□□□□□ -0.67
SNRPF-204ENST00000552085 ZNF433Q8N7K0 673 aaPredicted RBP10.85□□□□□ -0.67
SNRPF-204ENST00000552085 SYT14Q8NB59 555 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 STAG3L4Q8TBR4 150 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 WDR60Q8WVS4 1066 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 ZMAT3Q9HA38 289 aaKnown RBP10.85□□□□□ -0.67
SNRPF-204ENST00000552085 VDAC3Q9Y277 283 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 BIRC6Q9NR09 4857 aa10.85□□□□□ -0.67
SNRPF-204ENST00000552085 TRAV20A0A0B4J274 112 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 GOLGA6L10A6NI86 522 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 ATP6V1G2-DDX39BF2Z307 99 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 SCAMP2O15127 329 aaKnown RBP10.84□□□□□ -0.67
SNRPF-204ENST00000552085 GMFGO60234 142 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 IL33O95760 270 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 STMN1P16949 149 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 PPOXP50336 477 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 SRSF4Q08170 494 aaKnown RBP10.84□□□□□ -0.67
SNRPF-204ENST00000552085 ACTRT1Q8TDG2 376 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 NEU4Q8WWR8 484 aaPredicted RBP10.84□□□□□ -0.67
SNRPF-204ENST00000552085 UBE2FQ969M7 185 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 CPNE4Q96A23 557 aaPredicted RBP10.84□□□□□ -0.67
SNRPF-204ENST00000552085 C1QTNF6Q9BXI9 259 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 TMEM185BQ9H7F4 350 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 NTMQ9P121 344 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 ADAM29Q9UKF5 820 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 ABCG2Q9UNQ0 655 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 MTO1Q9Y2Z2 717 aaKnown RBP10.84□□□□□ -0.67
SNRPF-204ENST00000552085 TRAF6Q9Y4K3 522 aa10.84□□□□□ -0.67
SNRPF-204ENST00000552085 LOC100653049A0A140TA62 436 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 CIB4A0PJX0 185 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 PHGDHO43175 533 aaKnown RBP10.83□□□□□ -0.68
SNRPF-204ENST00000552085 KRT34O76011 436 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 GBAP04062 536 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 ERCC1P07992 297 aaPredicted RBP10.83□□□□□ -0.68
SNRPF-204ENST00000552085 PCSK2P16519 638 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 CSNK2A2P19784 350 aaPredicted RBP10.83□□□□□ -0.68
SNRPF-204ENST00000552085 MDKP21741 143 aaPredicted RBP10.83□□□□□ -0.68
SNRPF-204ENST00000552085 FPR2P25090 351 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 EDNRAP25101 427 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 CDC25BP30305 580 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 SERPINF1P36955 418 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 ZKSCAN8Q15776 578 aaPredicted RBP10.83□□□□□ -0.68
SNRPF-204ENST00000552085 SLC48A1Q6P1K1 146 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 NPSR1Q6W5P4 371 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 RBMS3Q6XE24 437 aaKnown RBP10.83□□□□□ -0.68
SNRPF-204ENST00000552085 FCRLAQ7L513 359 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 ISCA2Q86U28 154 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 GTPBP8Q8N3Z3 284 aaPredicted RBP10.83□□□□□ -0.68
SNRPF-204ENST00000552085 CLDND2Q8NHS1 167 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.83□□□□□ -0.68
SNRPF-204ENST00000552085 WDR20Q8TBZ3 569 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 TRPC4APQ8TEL6 797 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 C22orf15Q8WYQ4 148 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 ERP27Q96DN0 273 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 DUX5Q96PT3 197 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 SERPINI1Q99574 410 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 GPR22Q99680 433 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 NPAS1Q99742 590 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 SRXN1Q9BYN0 137 aa10.83□□□□□ -0.68
SNRPF-204ENST00000552085 CAB39LQ9H9S4 337 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms