RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 VCXQ9H320 206 aa2.69□□□□□ -1.98
GPN3-209ENST00000551079 PRG3Q9Y2Y8 225 aaPredicted RBP2.69□□□□□ -1.98
GPN3-209ENST00000551079 DHX29Q7Z478 1369 aaKnown RBP2.69□□□□□ -1.98
GPN3-209ENST00000551079 FAM166BA8MTA8 275 aa2.68□□□□□ -1.98
GPN3-209ENST00000551079 CASKO14936 926 aa2.68□□□□□ -1.98
GPN3-209ENST00000551079 TRAF3IP2O43734 574 aaPredicted RBP2.68□□□□□ -1.98
GPN3-209ENST00000551079 NDUFA7O95182 113 aa2.68□□□□□ -1.98
GPN3-209ENST00000551079 H2AFXP16104 143 aaPredicted RBP2.68□□□□□ -1.98
GPN3-209ENST00000551079 PTPN6P29350 595 aa2.68□□□□□ -1.98
GPN3-209ENST00000551079 HTR5AP47898 357 aa2.68□□□□□ -1.98
GPN3-209ENST00000551079 HERVK_113P61574 105 aa2.68□□□□□ -1.98
GPN3-209ENST00000551079 CDKN3Q16667 212 aa2.68□□□□□ -1.98
GPN3-209ENST00000551079 C2orf76Q3KRA6 126 aa2.68□□□□□ -1.98
GPN3-209ENST00000551079 TOR1AIP1Q5JTV8 583 aa2.68□□□□□ -1.98
GPN3-209ENST00000551079 PVRIGQ6DKI7 326 aa2.68□□□□□ -1.98
GPN3-209ENST00000551079 OR8G2PQ6IF36 304 aa2.68□□□□□ -1.98
GPN3-209ENST00000551079 SLC25A36Q96CQ1 311 aa2.68□□□□□ -1.98
GPN3-209ENST00000551079 NFKBIZQ9BYH8 718 aa2.68□□□□□ -1.98
GPN3-209ENST00000551079 MID1IP1Q9NPA3 183 aa2.68□□□□□ -1.98
GPN3-209ENST00000551079 CWC25Q9NXE8 425 aaPredicted RBP2.68□□□□□ -1.98
GPN3-209ENST00000551079 PSMB11A5LHX3 300 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 E9PMD0 336 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 SGK494L7N484 410 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 KINO60870 393 aaKnown RBP2.67□□□□□ -1.98
GPN3-209ENST00000551079 NPIPB7O75200 414 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 HMOX1P09601 288 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 APOC4P55056 127 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 LIM2P55344 173 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 SLC39A4Q6P5W5 647 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 Q7L0L9 218 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 LRRC70Q7Z2Q7 622 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 HSD11B1LQ7Z5J1 315 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 TICAM2Q86XR7 235 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 CNTN4Q8IWV2 1026 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 FAM71E2Q8N5Q1 922 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 EXOC6Q8TAG9 804 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 OR1E3Q8WZA6 343 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 SNX21Q969T3 373 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 TBC1D10AQ9BXI6 508 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 SLC17A9Q9BYT1 436 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 ALDH8A1Q9H2A2 487 aaPredicted RBP2.67□□□□□ -1.98
GPN3-209ENST00000551079 CYP39A1Q9NYL5 469 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 ZNF225Q9UK10 706 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 UBQLN1Q9UMX0 589 aaKnown RBP2.67□□□□□ -1.98
GPN3-209ENST00000551079 MAB21L2Q9Y586 359 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 TEX264Q9Y6I9 313 aa2.67□□□□□ -1.98
GPN3-209ENST00000551079 A6NDX4 124 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 AKR7A3O95154 331 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 PNPP00491 289 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 INSP01308 110 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 CSF2P04141 144 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 GCFC2P16383 781 aaKnown RBP2.66□□□□□ -1.98
GPN3-209ENST00000551079 HNRNPA2B1P22626 353 aaKnown RBP2.66□□□□□ -1.98
GPN3-209ENST00000551079 CCNCP24863 283 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 CSNK1DP48730 415 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 SUCLG1P53597 346 aaKnown RBP2.66□□□□□ -1.98
GPN3-209ENST00000551079 PAX5Q02548 391 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 RPA4Q13156 261 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 EIF4EBP1Q13541 118 aaPredicted RBP2.66□□□□□ -1.98
GPN3-209ENST00000551079 CCDC184Q52MB2 194 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 WDR74Q6RFH5 385 aaPredicted RBP2.66□□□□□ -1.98
GPN3-209ENST00000551079 ARSKQ6UWY0 536 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 ADAMTSL2Q86TH1 951 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 LINC01551Q86U37 167 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 Q8N9W7 124 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 ZSCAN4Q8NAM6 433 aaPredicted RBP2.66□□□□□ -1.98
GPN3-209ENST00000551079 MDS2Q8NDY4 140 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 OR2T33Q8NG76 320 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 CABS1Q96KC9 395 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 CCDC43Q96MW1 224 aaKnown RBP2.66□□□□□ -1.98
GPN3-209ENST00000551079 ARHGDIGQ99819 225 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 FEM1AQ9BSK4 669 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 COMMD4Q9H0A8 199 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 NTN4Q9HB63 628 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 TRPV5Q9NQA5 729 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 RIMS3Q9UJD0 308 aa2.66□□□□□ -1.98
GPN3-209ENST00000551079 PRPF19Q9UMS4 504 aaKnown RBP2.66□□□□□ -1.98
GPN3-209ENST00000551079 IGLV4-60A0A075B6I1 120 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 LRCOL1A6NCL2 159 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 A8MUA0 341 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 K7N7A8 449 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 MMP1P03956 469 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 TSPAN8P19075 237 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 AQP1P29972 269 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 AXLP30530 894 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 COPB2P35606 906 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 ACTN3Q08043 901 aaPredicted RBP2.65□□□□□ -1.99
GPN3-209ENST00000551079 TFDP1Q14186 410 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 LASP1Q14847 261 aaKnown RBP2.65□□□□□ -1.99
GPN3-209ENST00000551079 SCYL2Q6P3W7 929 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 RNF165Q6ZSG1 346 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 KRT35Q92764 455 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 CHIAQ9BZP6 476 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 RPAP3Q9H6T3 665 aaPredicted RBP2.65□□□□□ -1.99
GPN3-209ENST00000551079 CRLS1Q9UJA2 301 aa2.65□□□□□ -1.99
GPN3-209ENST00000551079 NKX2-6A6NCS4 301 aa2.64□□□□□ -1.99
GPN3-209ENST00000551079 CXCL10P02778 98 aa2.64□□□□□ -1.99
GPN3-209ENST00000551079 RCC1P18754 421 aaPredicted RBP2.64□□□□□ -1.99
GPN3-209ENST00000551079 NOVA1P51513 510 aaKnown RBP2.64□□□□□ -1.99
GPN3-209ENST00000551079 FAM220AQ7Z4H9 259 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms