RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 FNDC9Q8TBE3 224 aa11.72□□□□□ -0.53
NPAS3-209ENST00000551008 JADE3Q92613 823 aa11.72□□□□□ -0.53
NPAS3-209ENST00000551008 STARD4Q96DR4 205 aa11.72□□□□□ -0.53
NPAS3-209ENST00000551008 DUSP26Q9BV47 211 aa11.72□□□□□ -0.53
NPAS3-209ENST00000551008 ACTRT3Q9BYD9 372 aa11.72□□□□□ -0.53
NPAS3-209ENST00000551008 RNF122Q9H9V4 155 aa11.72□□□□□ -0.53
NPAS3-209ENST00000551008 UBQLN4Q9NRR5 601 aa11.72□□□□□ -0.53
NPAS3-209ENST00000551008 RASSF1Q9NS23 344 aa11.72□□□□□ -0.53
NPAS3-209ENST00000551008 MED17Q9NVC6 651 aa11.72□□□□□ -0.53
NPAS3-209ENST00000551008 GIN1Q9NXP7 522 aa11.72□□□□□ -0.53
NPAS3-209ENST00000551008 NOP53Q9NZM5 478 aaKnown RBP11.72□□□□□ -0.53
NPAS3-209ENST00000551008 KCNE5Q9UJ90 142 aa11.72□□□□□ -0.53
NPAS3-209ENST00000551008 FOXD3Q9UJU5 478 aaPredicted RBP11.72□□□□□ -0.53
NPAS3-209ENST00000551008 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.72□□□□□ -0.53
NPAS3-209ENST00000551008 ROS1P08922 2347 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 C7orf72A4D263 438 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 SLC22A20A6NK97 555 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 SDHDO14521 159 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 NDUFB5O43674 189 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 EFNA2O43921 213 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 TNFRSF21O75509 655 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 AQP8O94778 261 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 ZWINTO95229 277 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 CGAP01215 116 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 LINGO3P0C6S8 592 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 LCN1P31025 176 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 ZNF117Q03924 483 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 DAZAP2Q15038 168 aaPredicted RBP11.71□□□□□ -0.53
NPAS3-209ENST00000551008 KLHL26Q53HC5 615 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 DCST2Q5T1A1 773 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 ZNF474Q6S9Z5 364 aaPredicted RBP11.71□□□□□ -0.53
NPAS3-209ENST00000551008 CBLN3Q6UW01 205 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 BTLAQ7Z6A9 289 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 LSRQ86X29 649 aaPredicted RBP11.71□□□□□ -0.53
NPAS3-209ENST00000551008 GTPBP8Q8N3Z3 284 aaPredicted RBP11.71□□□□□ -0.53
NPAS3-209ENST00000551008 OR56A1Q8NGH5 318 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 PPP1R14CQ8TAE6 165 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 FAM222BQ8WU58 562 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 SMPDL3BQ92485 455 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 TLCD1Q96CP7 247 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 SH3YL1Q96HL8 342 aaPredicted RBP11.71□□□□□ -0.53
NPAS3-209ENST00000551008 TEX37Q96LM6 180 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 RNF145Q96MT1 663 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 OR7D2Q96RA2 312 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 PIGQQ9BRB3 760 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 RBM24Q9BX46 236 aaKnown RBP11.71□□□□□ -0.53
NPAS3-209ENST00000551008 PINK1Q9BXM7 581 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 NUF2Q9BZD4 464 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 CENPHQ9H3R5 247 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 PTGES2Q9H7Z7 377 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 MEAF6Q9HAF1 191 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 SLC24A3Q9HC58 644 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 NEUROD4Q9HD90 331 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 ATAD3AQ9NVI7 634 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 DNAJB12Q9NXW2 375 aaKnown RBP11.71□□□□□ -0.53
NPAS3-209ENST00000551008 PACSIN3Q9UKS6 424 aa11.71□□□□□ -0.53
NPAS3-209ENST00000551008 EIF3LQ9Y262 564 aaKnown RBP11.71□□□□□ -0.53
NPAS3-209ENST00000551008 TMEM120BA0PK00 339 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 SIAH2O43255 324 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 SNNO75324 88 aaPredicted RBP11.7□□□□□ -0.54
NPAS3-209ENST00000551008 MYZAPP0CAP1 466 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 ZNF17P17021 662 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 IL12AP29459 219 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 CLK3P49761 638 aaKnown RBP11.7□□□□□ -0.54
NPAS3-209ENST00000551008 RPL14P50914 215 aaKnown RBP11.7□□□□□ -0.54
NPAS3-209ENST00000551008 PLAURQ03405 335 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 FUT5Q11128 374 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 STX3Q13277 289 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 PON3Q15166 354 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 TOMM34Q15785 309 aaPredicted RBP11.7□□□□□ -0.54
NPAS3-209ENST00000551008 PGS1Q32NB8 556 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 BEND6Q5SZJ8 279 aaPredicted RBP11.7□□□□□ -0.54
NPAS3-209ENST00000551008 SPNS3Q6ZMD2 512 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 ANKRD46Q86W74 232 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 CDC20BQ86Y33 519 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 MEIOBQ8N635 442 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 ANKRD42Q8N9B4 389 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 OR8J2Q8NGG1 315 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 GOT1L1Q8NHS2 421 aaPredicted RBP11.7□□□□□ -0.54
NPAS3-209ENST00000551008 ACTRT2Q8TDY3 377 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 ARSGQ96EG1 525 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 DTNBP1Q96EV8 351 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 SDF2Q99470 211 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 KCNK9Q9NPC2 374 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 ICAM5Q9UMF0 924 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 ZNF175Q9Y473 711 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 AP4B1Q9Y6B7 739 aa11.7□□□□□ -0.54
NPAS3-209ENST00000551008 A0A0J9YW62 118 aa11.69□□□□□ -0.54
NPAS3-209ENST00000551008 PRAMEF27A3QJZ7 478 aa11.69□□□□□ -0.54
NPAS3-209ENST00000551008 TUBAL3A6NHL2 446 aa11.69□□□□□ -0.54
NPAS3-209ENST00000551008 C9JVG2 144 aa11.69□□□□□ -0.54
NPAS3-209ENST00000551008 LINC01387J3KSC0 135 aa11.69□□□□□ -0.54
NPAS3-209ENST00000551008 RNASET2O00584 256 aaKnown RBP11.69□□□□□ -0.54
NPAS3-209ENST00000551008 BCAS1O75363 584 aaPredicted RBP11.69□□□□□ -0.54
NPAS3-209ENST00000551008 NTN1O95631 604 aa11.69□□□□□ -0.54
NPAS3-209ENST00000551008 OPN1LWP04000 364 aa11.69□□□□□ -0.54
NPAS3-209ENST00000551008 CRHP06850 196 aa11.69□□□□□ -0.54
NPAS3-209ENST00000551008 EPXP11678 715 aa11.69□□□□□ -0.54
NPAS3-209ENST00000551008 SOAT1P35610 550 aa11.69□□□□□ -0.54
NPAS3-209ENST00000551008 PEX19P40855 299 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms