RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 UBQLN3Q9H347 655 aa13.17□□□□□ -0.3
CALCOCO1-218ENST00000550804 ISG20L2Q9H9L3 353 aaKnown RBP13.17□□□□□ -0.3
CALCOCO1-218ENST00000550804 TBC1D17Q9HA65 648 aa13.17□□□□□ -0.3
CALCOCO1-218ENST00000550804 C2orf42Q9NWW7 574 aa13.17□□□□□ -0.3
CALCOCO1-218ENST00000550804 USP36Q9P275 1121 aaKnown RBP13.17□□□□□ -0.3
CALCOCO1-218ENST00000550804 POU2F3Q9UKI9 436 aa13.17□□□□□ -0.3
CALCOCO1-218ENST00000550804 CBLCQ9ULV8 474 aa13.17□□□□□ -0.3
CALCOCO1-218ENST00000550804 C19orf53Q9UNZ5 99 aaPredicted RBP13.17□□□□□ -0.3
CALCOCO1-218ENST00000550804 SPTBP11277 2137 aa13.17□□□□□ -0.3
CALCOCO1-218ENST00000550804 SHISA3A0PJX4 238 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 SOX1O00570 391 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 ADAM11O75078 769 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 NCR1O76036 304 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 SNX4O95219 450 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 SEMA4FO95754 770 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 CHRNB1P11230 501 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 CELP19835 753 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 IFNA8P32881 189 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 ATP6V1E1P36543 226 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 STAT5AP42229 794 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 MGAT2Q10469 447 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 ZNF155Q12901 538 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 DUSP8Q13202 625 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 OR1Q1Q15612 314 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 NXNL2Q5VZ03 156 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 PLBD1Q6P4A8 553 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 ABHD13Q7L211 337 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 CAMKVQ8NCB2 501 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 OR4N2Q8NGD1 307 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 RERGQ96A58 199 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 SECISBP2Q96T21 854 aaKnown RBP13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 TBX5Q99593 518 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 PIGUQ9H490 435 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 C2orf92A0A1B0GVN3 265 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 TMEM129A0AVI4 362 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 RFPL3O75679 317 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 CDC123O75794 336 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 PTTG1O95997 202 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 GCGRP47871 477 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 RUNX1T1Q06455 604 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 ILF3Q12906 894 aaKnown RBP eCLIP13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 TPBGQ13641 420 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 SMAD2Q15796 467 aaKnown RBP13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 PGGHGQ32M88 737 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 UBE2J2Q8N2K1 259 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 SIRT6Q8N6T7 355 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 OR51G2Q8NGK0 314 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 BAHD1Q8TBE0 780 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 SLC37A2Q8TED4 501 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 ZNF350Q9GZX5 532 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 IL21RQ9HBE5 538 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 NLGN3Q9NZ94 848 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 PTGFRNQ9P2B2 879 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 CLCA2Q9UQC9 943 aa13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 RBMX2Q9Y388 322 aaKnown RBP13.16□□□□□ -0.3
CALCOCO1-218ENST00000550804 HRKO00198 91 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 OR5F1O95221 314 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 GPR75O95800 540 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 IGHV4-34P06331 123 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 TMED10P49755 219 aaKnown RBP13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 PRICKLE4Q2TBC4 344 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 THSD4Q6ZMP0 1018 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 COX18Q8N8Q8 333 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 IL17RDQ8NFM7 739 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 OR2T33Q8NG76 320 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 OR9A4Q8NGU2 314 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 C17orf50Q8WW18 174 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 SPRYD4Q8WW59 207 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 RSC1A1Q92681 617 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 KCTD7Q96MP8 289 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 OR52D1Q9H346 318 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 URADA6NGE7 173 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 TNFRSF10CO14798 259 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 PRKNO60260 465 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 RDH16O75452 317 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 STX11O75558 287 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 RFX2P48378 723 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 ERV3-1Q14264 604 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 ZNF687Q8N1G0 1237 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 CSNK1A1LQ8N752 337 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 ZNF614Q8N883 585 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 GRHL3Q8TE85 626 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 TWSG1Q9GZX9 223 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 ANKRD19PQ9H560 264 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 SIDT1Q9NXL6 827 aaKnown RBP13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 MAT2BQ9NZL9 334 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 PAIP2BQ9ULR5 123 aaKnown RBP13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 COLQQ9Y215 455 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 CMAHPQ9Y471 501 aa13.15□□□□□ -0.3
CALCOCO1-218ENST00000550804 CDHR4A6H8M9 788 aa13.14□□□□□ -0.31
CALCOCO1-218ENST00000550804 SNTNA6NMZ2 147 aa13.14□□□□□ -0.31
CALCOCO1-218ENST00000550804 REM1O75628 298 aa13.14□□□□□ -0.31
CALCOCO1-218ENST00000550804 IL1AP01583 271 aa13.14□□□□□ -0.31
CALCOCO1-218ENST00000550804 ATP1B1P05026 303 aa13.14□□□□□ -0.31
CALCOCO1-218ENST00000550804 IFI30P13284 250 aa13.14□□□□□ -0.31
CALCOCO1-218ENST00000550804 ST6GAL1P15907 406 aa13.14□□□□□ -0.31
CALCOCO1-218ENST00000550804 AKT2P31751 481 aa13.14□□□□□ -0.31
CALCOCO1-218ENST00000550804 YPEL5P62699 121 aa13.14□□□□□ -0.31
CALCOCO1-218ENST00000550804 DAB2P98082 770 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms