RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 OR6K3Q8NGY3 331 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 CDC26Q8NHZ8 85 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 DUSP19Q8WTR2 217 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 ZNF764Q96H86 408 aaPredicted RBP6.84□□□□□ -1.31
NEK3-201ENST00000550331 GMPPAQ96IJ6 420 aaPredicted RBP6.84□□□□□ -1.31
NEK3-201ENST00000550331 C16orf45Q96MC5 204 aaPredicted RBP6.84□□□□□ -1.31
NEK3-201ENST00000550331 Q96MF0 132 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 GSX2Q9BZM3 304 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 RTN4RQ9BZR6 473 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 IQCGQ9H095 443 aaKnown RBP6.84□□□□□ -1.31
NEK3-201ENST00000550331 OR10A4Q9H209 315 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 FANCFQ9NPI8 374 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 RRAGDQ9NQL2 400 aaPredicted RBP6.84□□□□□ -1.31
NEK3-201ENST00000550331 PLSCR4Q9NRQ2 329 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 PSMC3IPQ9P2W1 217 aaPredicted RBP6.84□□□□□ -1.31
NEK3-201ENST00000550331 DCDC2Q9UHG0 476 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 EMC9Q9Y3B6 208 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 EXPH5Q8NEV8 1989 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 RNF212BA8MTL3 300 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 ALG1L2C9J202 215 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 G3V2L1 256 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 GOLGA8RI6L899 631 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 RIPK2O43353 540 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 TMCC2O75069 709 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 SS18L1O75177 396 aaPredicted RBP6.83□□□□□ -1.32
NEK3-201ENST00000550331 GLRA3O75311 464 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 CRCPO75575 148 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 AQP8O94778 261 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 UTS2O95399 124 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 MYL2P10916 166 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 PAX1P15863 534 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 TBXA2RP21731 343 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 PRPH2P23942 346 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 GABRA3P34903 492 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 MAP3K8P41279 467 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 EIF1AXP47813 144 aaKnown RBP6.83□□□□□ -1.32
NEK3-201ENST00000550331 RFX3P48380 749 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 NR1H2P55055 460 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 SLC29A2Q14542 456 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 KIAA0040Q15053 153 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 GRAMD1BQ3KR37 738 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 BEX5Q5H9J7 111 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 ZYG11AQ6WRX3 759 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 FRMD7Q6ZUT3 714 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 ZNF550Q7Z398 422 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 YTHDF3Q7Z739 585 aaKnown RBP6.83□□□□□ -1.32
NEK3-201ENST00000550331 MISPQ8IVT2 679 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 WDR75Q8IWA0 830 aaKnown RBP6.83□□□□□ -1.32
NEK3-201ENST00000550331 GTPBP8Q8N3Z3 284 aaPredicted RBP6.83□□□□□ -1.32
NEK3-201ENST00000550331 CCNYL1Q8N7R7 359 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 CDRT4Q8N9R6 151 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 OR5M1Q8NGP8 315 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 PPP1R14CQ8TAE6 165 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 ACTRT2Q8TDY3 377 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 MZB1Q8WU39 189 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 IGFBPL1Q8WX77 278 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 ZBTB8AQ96BR9 441 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 PERPQ96FX8 193 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 ADGRG7Q96K78 797 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 GLRX2Q9NS18 164 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 POLR3HQ9Y535 204 aaPredicted RBP6.83□□□□□ -1.32
NEK3-201ENST00000550331 DOCK7Q96N67 2140 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 CUBNO60494 3623 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 DSCAMO60469 2012 aa6.83□□□□□ -1.32
NEK3-201ENST00000550331 NINQ8N4C6 2090 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 UQCRHLA0A096LP55 91 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.82□□□□□ -1.32
NEK3-201ENST00000550331 GXYLT2A0PJZ3 443 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 SLC28A1O00337 649 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 EIF1AYO14602 144 aaKnown RBP6.82□□□□□ -1.32
NEK3-201ENST00000550331 ADAMDEC1O15204 470 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 KLF4O43474 513 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 NDUFB5O43674 189 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 TBX19O60806 448 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 NKX2-2O95096 273 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 OXSR1O95747 527 aaPredicted RBP6.82□□□□□ -1.32
NEK3-201ENST00000550331 PLGP00747 810 aaPredicted RBP6.82□□□□□ -1.32
NEK3-201ENST00000550331 IGKV1D-16P01601 117 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 THBDP07204 575 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 UROSP10746 265 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 PRPS2P11908 318 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 PSMA4P25789 261 aaKnown RBP6.82□□□□□ -1.32
NEK3-201ENST00000550331 NOS3P29474 1203 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 LCN1P31025 176 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 FRKP42685 505 aaPredicted RBP6.82□□□□□ -1.32
NEK3-201ENST00000550331 SLC6A8P48029 635 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 PTH2RP49190 550 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 CTBP2P56545 445 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 DNAJB13P59910 316 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 HSPB3Q12988 150 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.82□□□□□ -1.32
NEK3-201ENST00000550331 CTU2Q2VPK5 515 aaKnown RBP6.82□□□□□ -1.32
NEK3-201ENST00000550331 PLPPR5Q32ZL2 321 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 CCDC153Q494R4 210 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 ZCCHC12Q6PEW1 402 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 APOOLQ6UXV4 268 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 STAC2Q6ZMT1 411 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 RNF165Q6ZSG1 346 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 BEND4Q6ZU67 534 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 C22orf34Q6ZV56 151 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms