RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 CLEC2DQ9UHP7 191 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 MRTO4Q9UKD2 239 aaKnown RBP8.31□□□□□ -1.08
TMEM116-209ENST00000550020 CAB39Q9Y376 341 aaPredicted RBP8.31□□□□□ -1.08
TMEM116-209ENST00000550020 PCDHGB6Q9Y5F9 930 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 B4DGG1 531 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 PRR23D1E9PI22 279 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 SGK494L7N484 410 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 FRS3O43559 492 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 RDH16O75452 317 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 DLGAP3O95886 979 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 PROS1P07225 676 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 PRR23D2P0DMB1 279 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 ZNF3P17036 446 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 HK1P19367 917 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 POU3F3P20264 500 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 F8A1P23610 371 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 LCN1P31025 176 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 TNFSF8P32971 234 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 SDC2P34741 201 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 TGFBR1P36897 503 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 RPS19P39019 145 aaKnown RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 CAPZBP47756 277 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 PSMD7P51665 324 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 EPHA4P54764 986 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 PPP3R1P63098 170 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 IGLV3-21P80748 117 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 ID2Q02363 134 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 MLLT1Q03111 559 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 MGAT2Q10469 447 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 ZNF141Q15928 474 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 CRTC2Q53ET0 693 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 SLC30A6Q6NXT4 461 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 ARHGAP11AQ6P4F7 1023 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 ULK3Q6PHR2 472 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 CD200R1LQ6Q8B3 271 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 METAP1DQ6UB28 335 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 RTL4Q6ZR62 310 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 PRR23CQ6ZRP0 262 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 QSOX2Q6ZRP7 698 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 MEPCEQ7L2J0 689 aaKnown RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 BTLAQ7Z6A9 289 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 SLITRK4Q8IW52 837 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 TDHQ8IZJ6 230 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 ACBD7Q8N6N7 88 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 LSMEM1Q8N8F7 131 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 GDPD1Q8N9F7 314 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 ZNF527Q8NB42 609 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 CADM4Q8NFZ8 388 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 OR7G1Q8NGA0 311 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 OR8D4Q8NGM9 314 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 OR4Q3Q8NH05 313 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 DNAJA4Q8WW22 397 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 ACOT12Q8WYK0 555 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 ZDHHC12Q96GR4 267 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 SAMD8Q96LT4 415 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 SLC38A3Q99624 504 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 KCNS3Q9BQ31 491 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 IFT27Q9BW83 186 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 RAB33BQ9H082 229 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 OR52D1Q9H346 318 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 FOLH1BQ9HBA9 442 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 MKKSQ9NPJ1 570 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 TRIM36Q9NQ86 728 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 PRTFDC1Q9NRG1 225 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 SNTG1Q9NSN8 517 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 EVA1BQ9NVM1 165 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 IRAK4Q9NWZ3 460 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 KLHL21Q9UJP4 597 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 ZNF223Q9UK11 482 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 ITGB1BP2Q9UKP3 347 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 NDRG2Q9UN36 371 aaKnown RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 POLHQ9Y253 713 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 SLC35A3Q9Y2D2 325 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 MRPS2Q9Y399 296 aaKnown RBP8.3□□□□□ -1.08
TMEM116-209ENST00000550020 CHST2Q9Y4C5 530 aa8.3□□□□□ -1.08
TMEM116-209ENST00000550020 TLCD2A6NGC4 264 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 SLC9B1P1A6NJY1 282 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 EFCAB7A8K855 629 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 H0YIG0 161 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 KCNK2O95069 426 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 CDRT1O95170 752 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 ZIC2O95409 532 aaPredicted RBP8.29□□□□□ -1.08
TMEM116-209ENST00000550020 CSF2P04141 144 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 LIMS3P0CW19 117 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 LIMS4P0CW20 117 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 SAGP10523 405 aaPredicted RBP8.29□□□□□ -1.08
TMEM116-209ENST00000550020 NME1P15531 152 aaKnown RBP8.29□□□□□ -1.08
TMEM116-209ENST00000550020 ST6GAL1P15907 406 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 CD38P28907 300 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 MLLT3P42568 568 aaPredicted RBP8.29□□□□□ -1.08
TMEM116-209ENST00000550020 LSSP48449 732 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 PPM1FP49593 454 aaPredicted RBP8.29□□□□□ -1.08
TMEM116-209ENST00000550020 ATP12AP54707 1039 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 GAS1P54826 345 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 PSPHP78330 225 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 SCN1BQ07699 218 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 LGALS3BPQ08380 585 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 TDGQ13569 410 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 GRM7Q14831 915 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms