RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 EML4Q9HC35 981 aaKnown RBP14.29□□□□□ -0.12
COX6A1-203ENST00000550009 SLC24A3Q9HC58 644 aa14.29□□□□□ -0.12
COX6A1-203ENST00000550009 SDHAF3Q9NRP4 125 aa14.29□□□□□ -0.12
COX6A1-203ENST00000550009 MED17Q9NVC6 651 aa14.29□□□□□ -0.12
COX6A1-203ENST00000550009 FOXD3Q9UJU5 478 aaPredicted RBP14.29□□□□□ -0.12
COX6A1-203ENST00000550009 TESMINQ9Y4I5 508 aa14.29□□□□□ -0.12
COX6A1-203ENST00000550009 TNFSF11O14788 317 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 TNFRSF21O75509 655 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 ATE1O95260 518 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 HPCAL1P37235 193 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 EIF1AXP47813 144 aaKnown RBP14.28□□□□□ -0.12
COX6A1-203ENST00000550009 CCT3P49368 545 aaKnown RBP14.28□□□□□ -0.12
COX6A1-203ENST00000550009 HBA1P69905 142 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 PHC1P78364 1004 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 POU6F2P78424 691 aaPredicted RBP14.28□□□□□ -0.12
COX6A1-203ENST00000550009 ZNF117Q03924 483 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 MLC1Q15049 377 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 PGS1Q32NB8 556 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 ATP6AP1LQ52LC2 224 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 CPTPQ5TA50 214 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 FBXW10Q5XX13 1052 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 OR4F3Q6IEY1 312 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 CDC73Q6P1J9 531 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 EMBQ6PCB8 327 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 PAMR1Q6UXH9 720 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 LRIG3Q6UXM1 1119 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 CHMP1BQ7LBR1 199 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 NUDCD3Q8IVD9 361 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 METTL25Q8N6Q8 603 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 OR10D3Q8NH80 312 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 LRRC46Q96FV0 321 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 ZC3HAV1LQ96H79 300 aaKnown RBP14.28□□□□□ -0.12
COX6A1-203ENST00000550009 TMUB1Q9BVT8 246 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 C3orf14Q9HBI5 128 aa14.28□□□□□ -0.12
COX6A1-203ENST00000550009 MRTO4Q9UKD2 239 aaKnown RBP14.28□□□□□ -0.12
COX6A1-203ENST00000550009 DEFB108AA8MXU0 73 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 C9JVG2 144 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 CXCL13O43927 109 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 CD1EP15812 388 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 KLK2P20151 261 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 BGNP21810 368 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 CLK3P49761 638 aaKnown RBP14.27□□□□□ -0.13
COX6A1-203ENST00000550009 PSMD4P55036 377 aaKnown RBP14.27□□□□□ -0.13
COX6A1-203ENST00000550009 FOXF1Q12946 379 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 R3HCC1LQ7Z5L2 792 aaKnown RBP14.27□□□□□ -0.13
COX6A1-203ENST00000550009 HMGN2P46Q86SG4 172 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 KRTAP1-3Q8IUG1 177 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 MTERF3Q96E29 417 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 HS3ST6Q96QI5 342 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 OR7D2Q96RA2 312 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 FOXC2Q99958 501 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 TMEM109Q9BVC6 243 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 BTBD2Q9BX70 525 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 PIGMQ9H3S5 423 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 GSX1Q9H4S2 264 aaPredicted RBP14.27□□□□□ -0.13
COX6A1-203ENST00000550009 AKTIPQ9H8T0 292 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 KCNE5Q9UJ90 142 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 CARD8Q9Y2G2 431 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 AP4B1Q9Y6B7 739 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 ZANQ9Y493 2812 aa14.27□□□□□ -0.13
COX6A1-203ENST00000550009 TMEM114B3SHH9 223 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 MSTNO14793 375 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 BCAS1O75363 584 aaPredicted RBP14.26□□□□□ -0.13
COX6A1-203ENST00000550009 HSPA4LO95757 839 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 NGFRP08138 427 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 LINGO3P0C6S8 592 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 SFTPDP35247 375 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 ABCE1P61221 599 aaKnown RBP14.26□□□□□ -0.13
COX6A1-203ENST00000550009 ADAM8P78325 824 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 FOXD4Q12950 439 aaPredicted RBP14.26□□□□□ -0.13
COX6A1-203ENST00000550009 EXOC3L2Q2M3D2 409 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 GLYR1Q49A26 553 aaPredicted RBP14.26□□□□□ -0.13
COX6A1-203ENST00000550009 VPS26BQ4G0F5 336 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 DCST2Q5T1A1 773 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 ANKRD46Q86W74 232 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 CNPY4Q8N129 248 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 GTPBP8Q8N3Z3 284 aaPredicted RBP14.26□□□□□ -0.13
COX6A1-203ENST00000550009 MREGQ8N565 214 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 B4GALNT2Q8NHY0 566 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 PSMA8Q8TAA3 256 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 PHOSPHO1Q8TCT1 267 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 ROBO4Q8WZ75 1007 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 OR5P2Q8WZ92 322 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 DACH2Q96NX9 599 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 ZIM3Q96PE6 472 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 DUSP26Q9BV47 211 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 ACTRT3Q9BYD9 372 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 SRXN1Q9BYN0 137 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 PIGUQ9H490 435 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 UBQLN4Q9NRR5 601 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 PNPOQ9NVS9 261 aa14.26□□□□□ -0.13
COX6A1-203ENST00000550009 TTC36A6NLP5 189 aa14.25□□□□□ -0.13
COX6A1-203ENST00000550009 NPIPB9F8W1W9 429 aa14.25□□□□□ -0.13
COX6A1-203ENST00000550009 CFLARO15519 480 aa14.25□□□□□ -0.13
COX6A1-203ENST00000550009 CTIFO43310 598 aaKnown RBP14.25□□□□□ -0.13
COX6A1-203ENST00000550009 DHRS4L1P0CG22 281 aa14.25□□□□□ -0.13
COX6A1-203ENST00000550009 CD53P19397 219 aa14.25□□□□□ -0.13
COX6A1-203ENST00000550009 DNASE1P24855 282 aa14.25□□□□□ -0.13
COX6A1-203ENST00000550009 LOXP28300 417 aaPredicted RBP14.25□□□□□ -0.13
COX6A1-203ENST00000550009 SOAT1P35610 550 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms