RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 HEPHL1Q6MZM0 1159 aa12.12□□□□□ -0.47
TROAP-211ENST00000549891 ZNF551Q7Z340 670 aaPredicted RBP12.12□□□□□ -0.47
TROAP-211ENST00000549891 SZRD1Q7Z422 152 aa12.12□□□□□ -0.47
TROAP-211ENST00000549891 TRABD2AQ86V40 505 aa12.12□□□□□ -0.47
TROAP-211ENST00000549891 MNS1Q8NEH6 495 aa12.12□□□□□ -0.47
TROAP-211ENST00000549891 NUP43Q8NFH3 380 aa12.12□□□□□ -0.47
TROAP-211ENST00000549891 OR4C3Q8NH37 302 aa12.12□□□□□ -0.47
TROAP-211ENST00000549891 OSTF1Q92882 214 aa12.12□□□□□ -0.47
TROAP-211ENST00000549891 CPNE4Q96A23 557 aaPredicted RBP12.12□□□□□ -0.47
TROAP-211ENST00000549891 ZBED6CLQ96FA7 236 aaPredicted RBP12.12□□□□□ -0.47
TROAP-211ENST00000549891 ZNF764Q96H86 408 aaPredicted RBP12.12□□□□□ -0.47
TROAP-211ENST00000549891 RNF145Q96MT1 663 aa12.12□□□□□ -0.47
TROAP-211ENST00000549891 MS4A4EQ96PG1 132 aa12.12□□□□□ -0.47
TROAP-211ENST00000549891 USB1Q9BQ65 265 aaKnown RBP12.12□□□□□ -0.47
TROAP-211ENST00000549891 UBQLN4Q9NRR5 601 aa12.12□□□□□ -0.47
TROAP-211ENST00000549891 MED17Q9NVC6 651 aa12.12□□□□□ -0.47
TROAP-211ENST00000549891 RNF115Q9Y4L5 304 aa12.12□□□□□ -0.47
TROAP-211ENST00000549891 FREM1Q5H8C1 2179 aa12.12□□□□□ -0.47
TROAP-211ENST00000549891 CR1P17927 2039 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 GJE1A6NN92 205 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 GOLGA8RI6L899 631 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 UBFD1O14562 309 aaKnown RBP12.11□□□□□ -0.47
TROAP-211ENST00000549891 SOX30O94993 753 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 KCNK2O95069 426 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 OPN1LWP04000 364 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 FESP07332 822 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 CD3EP07766 207 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 IL32P24001 234 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 PSMA4P25789 261 aaKnown RBP12.11□□□□□ -0.47
TROAP-211ENST00000549891 ELK4P28324 431 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 GCAP28676 217 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 ECHS1P30084 290 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 MANFP55145 182 aaKnown RBP12.11□□□□□ -0.47
TROAP-211ENST00000549891 ALKBH2Q6NS38 261 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 ZCCHC12Q6PEW1 402 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 FRMD7Q6ZUT3 714 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 TRMT10CQ7L0Y3 403 aaKnown RBP12.11□□□□□ -0.47
TROAP-211ENST00000549891 LILRA2Q8N149 483 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 C17orf53Q8N3J3 647 aaPredicted RBP12.11□□□□□ -0.47
TROAP-211ENST00000549891 GATSQ8NAP1 163 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 B4GALNT2Q8NHY0 566 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 HSD17B8Q92506 261 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 GTPBP3Q969Y2 492 aaKnown RBP12.11□□□□□ -0.47
TROAP-211ENST00000549891 S100PBPQ96BU1 408 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 PPCDCQ96CD2 204 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 KLHL15Q96M94 604 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 TMEM185BQ9H7F4 350 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 GP6Q9HCN6 339 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 NTMQ9P121 344 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.11□□□□□ -0.47
TROAP-211ENST00000549891 ATRQ13535 2644 aa12.11□□□□□ -0.47
TROAP-211ENST00000549891 A0A0J9YW62 118 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 A0A1W2PQD3 144 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 RNF223E7ERA6 249 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 SLC28A1O00337 649 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 CLOCKO15516 846 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 RGS14O43566 566 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 ALOX5P09917 674 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 UROSP10746 265 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 PYGBP11216 843 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 NID1P14543 1247 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 DDX5P17844 614 aaKnown RBP12.1□□□□□ -0.47
TROAP-211ENST00000549891 PRPH2P23942 346 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 CAPRIN1Q14444 709 aaKnown RBP12.1□□□□□ -0.47
TROAP-211ENST00000549891 ZNF239Q16600 458 aaKnown RBP12.1□□□□□ -0.47
TROAP-211ENST00000549891 NCMAPQ5T1S8 102 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 SFRP5Q5T4F7 317 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 MFSD12Q6NUT3 480 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 FIGNL1Q6PIW4 674 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 ZYG11AQ6WRX3 759 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 MTERF4Q7Z6M4 381 aaKnown RBP12.1□□□□□ -0.47
TROAP-211ENST00000549891 HOMEZQ8IX15 550 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 CEP112Q8N8E3 955 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 COX18Q8N8Q8 333 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 FAM110BQ8TC76 370 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 RNF128Q8TEB7 428 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 SMAP2Q8WU79 429 aaPredicted RBP12.1□□□□□ -0.47
TROAP-211ENST00000549891 CIDECQ96AQ7 238 aaPredicted RBP12.1□□□□□ -0.47
TROAP-211ENST00000549891 SH3YL1Q96HL8 342 aaPredicted RBP12.1□□□□□ -0.47
TROAP-211ENST00000549891 EGLN2Q96KS0 407 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 CCT7Q99832 543 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 REEP4Q9H6H4 257 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 ACSS1Q9NUB1 689 aaPredicted RBP12.1□□□□□ -0.47
TROAP-211ENST00000549891 FBXO34Q9NWN3 711 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 C1orf109Q9NX04 203 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 PSMC3IPQ9P2W1 217 aaPredicted RBP12.1□□□□□ -0.47
TROAP-211ENST00000549891 ABCA1O95477 2261 aa12.1□□□□□ -0.47
TROAP-211ENST00000549891 FBN1P35555 2871 aaKnown RBP12.1□□□□□ -0.47
TROAP-211ENST00000549891 SONP18583 2426 aaKnown RBP12.1□□□□□ -0.47
TROAP-211ENST00000549891 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.09□□□□□ -0.47
TROAP-211ENST00000549891 A0A1W2PP18 115 aa12.09□□□□□ -0.47
TROAP-211ENST00000549891 NPIPB8E9PQR5 432 aa12.09□□□□□ -0.47
TROAP-211ENST00000549891 G3V2L1 256 aa12.09□□□□□ -0.47
TROAP-211ENST00000549891 OVOL3O00110 214 aa12.09□□□□□ -0.47
TROAP-211ENST00000549891 RIPK2O43353 540 aa12.09□□□□□ -0.47
TROAP-211ENST00000549891 TBX19O60806 448 aa12.09□□□□□ -0.47
TROAP-211ENST00000549891 GLRA3O75311 464 aa12.09□□□□□ -0.47
TROAP-211ENST00000549891 GCM2O75603 506 aaPredicted RBP12.09□□□□□ -0.47
TROAP-211ENST00000549891 IFNA2P01563 188 aa12.09□□□□□ -0.47
TROAP-211ENST00000549891 LINGO3P0C6S8 592 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms