RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 C16orf62Q7Z3J2 963 aa14.27□□□□□ -0.13
DDX54-205ENST00000548786 HMGN2P46Q86SG4 172 aa14.27□□□□□ -0.13
DDX54-205ENST00000548786 RFWD2Q8NHY2 731 aa14.27□□□□□ -0.13
DDX54-205ENST00000548786 XAGE5Q8WWM1 108 aa14.27□□□□□ -0.13
DDX54-205ENST00000548786 ARSGQ96EG1 525 aa14.27□□□□□ -0.13
DDX54-205ENST00000548786 CCDC115Q96NT0 180 aa14.27□□□□□ -0.13
DDX54-205ENST00000548786 EBF4Q9BQW3 602 aa14.27□□□□□ -0.13
DDX54-205ENST00000548786 TACC2O95359 2948 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 IGLV3-32A0A0A0MS00 114 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 CENPVL1A0A0U1RR11 272 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 CCDC154A6NI56 674 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 HSPB2A8KAH6 182 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 FAM47E-STBD1D6RA91 191 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 TNFRSF21O75509 655 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 NUDT14O95848 222 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 IL2RAP01589 272 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 NGFRP08138 427 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 ZNF708P17019 499 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 CHMP24386 653 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 KHKP50053 298 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 ZNF136P52737 540 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 ZNF117Q03924 483 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 TFF3Q07654 80 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 SF3B4Q15427 424 aaKnown RBP eCLIP14.26□□□□□ -0.13
DDX54-205ENST00000548786 HSPB2Q16082 182 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 TIGD2Q4W5G0 525 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 PDCD4Q53EL6 469 aaKnown RBP14.26□□□□□ -0.13
DDX54-205ENST00000548786 SAXO2Q658L1 398 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 PPP4R4Q6NUP7 873 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 ZNF621Q6ZSS3 439 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 RNF130Q86XS8 419 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 GCNT2Q8N0V5 402 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 TMCO5AQ8N6Q1 288 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 ZNF527Q8NB42 609 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 SDF2Q99470 211 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 PIGQQ9BRB3 760 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 TMEM185BQ9H7F4 350 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 BTNL2Q9UIR0 455 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 MKLN1Q9UL63 735 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 CARD8Q9Y2G2 431 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 MRPS18CQ9Y3D5 142 aaKnown RBP14.26□□□□□ -0.13
DDX54-205ENST00000548786 APCP25054 2843 aa14.26□□□□□ -0.13
DDX54-205ENST00000548786 CD8B2A6NJW9 211 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 GTPBP1O00178 669 aaKnown RBP14.25□□□□□ -0.13
DDX54-205ENST00000548786 POLR3GO15318 223 aaPredicted RBP14.25□□□□□ -0.13
DDX54-205ENST00000548786 FCMRO60667 390 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 MSX1P28360 303 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 CEACAM8P31997 349 aaPredicted RBP14.25□□□□□ -0.13
DDX54-205ENST00000548786 IDH3AP50213 366 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 CCR4P51679 360 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 ZNF41P51814 821 aaPredicted RBP14.25□□□□□ -0.13
DDX54-205ENST00000548786 SUCLG1P53597 346 aaKnown RBP14.25□□□□□ -0.13
DDX54-205ENST00000548786 AQP5P55064 265 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 CLDN20P56880 219 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 PDZK1Q5T2W1 519 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 CBLN3Q6UW01 205 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 GRAMD2AQ8IUY3 354 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 RELL2Q8NC24 303 aaPredicted RBP14.25□□□□□ -0.13
DDX54-205ENST00000548786 B4GALNT2Q8NHY0 566 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 ZPLD1Q8TCW7 415 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 VPS33AQ96AX1 596 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 NEURL3Q96EH8 262 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 CALHM2Q9HA72 323 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 TCF7L2Q9NQB0 619 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 SLC6A13Q9NSD5 602 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 MED17Q9NVC6 651 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 ZNF446Q9NWS9 450 aa14.25□□□□□ -0.13
DDX54-205ENST00000548786 HCFC1P51610 2035 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 MBD3L4A6NDZ8 208 aaPredicted RBP14.24□□□□□ -0.13
DDX54-205ENST00000548786 MBD3L3A6NE82 208 aaPredicted RBP14.24□□□□□ -0.13
DDX54-205ENST00000548786 MBD3L5A6NJ08 208 aaPredicted RBP14.24□□□□□ -0.13
DDX54-205ENST00000548786 DUXAA6NLW8 204 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 EEF1E1-BLOC1S5C9J1V9 151 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 RFXANKO14593 260 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 DVL2O14641 736 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 EEF1E1O43324 174 aaKnown RBP14.24□□□□□ -0.13
DDX54-205ENST00000548786 CYP7B1O75881 506 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 TMIGD3P0DMS9 266 aaPredicted RBP14.24□□□□□ -0.13
DDX54-205ENST00000548786 PEPDP12955 493 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 LCN1P31025 176 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 UQCRC1P31930 480 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 TIMP3P35625 211 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 ATP12AP54707 1039 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 FUT5Q11128 374 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 FOXF2Q12947 444 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 GSTA3Q16772 222 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 GTDC1Q4AE62 458 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 GPAT3Q53EU6 434 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 KLHL26Q53HC5 615 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 ATAD3BQ5T9A4 648 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 CHMP1BQ7LBR1 199 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 P4HA3Q7Z4N8 544 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 MIER2Q8N344 545 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 MEIOBQ8N635 442 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 TRIML2Q8N7C3 387 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 GLB1L3Q8NCI6 653 aaPredicted RBP14.24□□□□□ -0.13
DDX54-205ENST00000548786 MBD3L2Q8NHZ7 208 aaPredicted RBP14.24□□□□□ -0.13
DDX54-205ENST00000548786 CKAP2Q8WWK9 683 aa14.24□□□□□ -0.13
DDX54-205ENST00000548786 INTS12Q96CB8 462 aaKnown RBP14.24□□□□□ -0.13
DDX54-205ENST00000548786 ZNF845Q96IR2 970 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms