RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	MAGEF1	Q9HAY2	307 aa		2.93	□□□□□ -1.94
RPAP3-205	ENST00000548211	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	2.93	□□□□□ -1.94
RPAP3-205	ENST00000548211	PHPT1	Q9NRX4	125 aa	Predicted RBP	2.93	□□□□□ -1.94
RPAP3-205	ENST00000548211	DNAJB9	Q9UBS3	223 aa		2.93	□□□□□ -1.94
RPAP3-205	ENST00000548211	LNPEP	Q9UIQ6	1025 aa		2.93	□□□□□ -1.94
RPAP3-205	ENST00000548211	MAN1B1	Q9UKM7	699 aa		2.93	□□□□□ -1.94
RPAP3-205	ENST00000548211	RARRES3	Q9UL19	164 aa		2.93	□□□□□ -1.94
RPAP3-205	ENST00000548211	VANGL2	Q9ULK5	521 aa		2.93	□□□□□ -1.94
RPAP3-205	ENST00000548211	OR1A2	Q9Y585	309 aa		2.93	□□□□□ -1.94
RPAP3-205	ENST00000548211	OR51B4	Q9Y5P0	310 aa		2.93	□□□□□ -1.94
RPAP3-205	ENST00000548211	POMT1	Q9Y6A1	747 aa		2.93	□□□□□ -1.94
RPAP3-205	ENST00000548211	AP1M2	Q9Y6Q5	423 aa		2.93	□□□□□ -1.94
RPAP3-205	ENST00000548211	CACNA1C	Q13936	2221 aa		2.93	□□□□□ -1.94
RPAP3-205	ENST00000548211	NIPBL	Q6KC79	2804 aa	eCLIP	2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	FN1	P02751	2386 aa	Known RBP	2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	PRSS51	A0A1B0GVH4	220 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	PVALEF	A0A1B0GWK0	134 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	OR5K4	A6NMS3	321 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211		K7ERQ8	282 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211		M0QYV0	167 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211		O00370	1275 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	PDXK	O00764	312 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	KLF11	O14901	512 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	RTL8C	O15255	209 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	MED7	O43513	233 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	SNAP91	O60641	907 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	IGSF6	O95976	241 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	IGLV3-25	P01717	112 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	PCCB	P05166	539 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	FGF1	P05230	155 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	HEXB	P07686	556 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	ABCB1	P08183	1280 aa	Predicted RBP	2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	DUX4L4	P0CJ87	422 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	ERCC2	P18074	760 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	CDH2	P19022	906 aa	Predicted RBP	2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	KLK2	P20151	261 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	PTAFR	P25105	342 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	NMBR	P28336	390 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	MMP12	P39900	470 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	NUMB	P49757	651 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	RGS7	P49802	495 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	GSDMD	P57764	484 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	POLR2L	P62875	67 aa	Known RBP	2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	FOLH1	Q04609	750 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	TLE4	Q04727	773 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	NIPAL4	Q0D2K0	466 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	GAGE2B	Q13066	116 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	RPA4	Q13156	261 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	RCN2	Q14257	317 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	WSCD2	Q2TBF2	565 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	GAGE2E	Q4V326	116 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	NHSL2	Q5HYW2	709 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	TOR1AIP1	Q5JTV8	583 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	BRMS1L	Q5PSV4	323 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	GAGE2A	Q6NT46	116 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	TRAT1	Q6PIZ9	186 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	LINGO4	Q6UY18	593 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	ADCK2	Q7Z695	626 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	TMEM135	Q86UB9	458 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	KCNMB4	Q86W47	210 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	RAB43	Q86YS6	212 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	LINC00346	Q8IVM7	164 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	BCORP1	Q8N888	145 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	IQUB	Q8NA54	791 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211		Q8NBF4	154 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	CLEC1A	Q8NC01	280 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	FBXL13	Q8NEE6	735 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	CT55	Q8WUE5	264 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	TEKT4	Q8WW24	435 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	OR1E3	Q8WZA6	343 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	RASL10A	Q92737	203 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	SGK494	Q96LW2	274 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	OR6C1	Q96RD1	312 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	NUDCD1	Q96RS6	583 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	RANBP9	Q96S59	729 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	ATP6V0B	Q99437	205 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	FOXC2	Q99958	501 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	NAA11	Q9BSU3	229 aa	Predicted RBP	2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	SPX	Q9BT56	116 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	NUDT9	Q9BW91	350 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	TM6SF2	Q9BZW4	377 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	APMAP	Q9HDC9	416 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	DMAC2	Q9NW81	257 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	DDIT4	Q9NX09	232 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	RAB20	Q9NX57	234 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	GAGE2D	Q9UEU5	116 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	SNX7	Q9UNH6	387 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	FARSA	Q9Y285	508 aa	Known RBP	2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	ITM2B	Q9Y287	266 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	PADI2	Q9Y2J8	665 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	PTRH2	Q9Y3E5	179 aa	Known RBP	2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	MFHAS1	Q9Y4C4	1052 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	SESN1	Q9Y6P5	492 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	SEC16A	O15027	2179 aa		2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	MN1	Q10571	1320 aa	Predicted RBP	2.92	□□□□□ -1.94
RPAP3-205	ENST00000548211	DNHD1	Q96M86	4753 aa		2.91	□□□□□ -1.94
RPAP3-205	ENST00000548211		A0A0D9SEW6	157 aa		2.91	□□□□□ -1.94
RPAP3-205	ENST00000548211		A0A1W2PQ67	120 aa		2.91	□□□□□ -1.94
RPAP3-205	ENST00000548211		A0A1W2PRV1	198 aa		2.91	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms