RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 OR2M5A3KFT3 312 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 CCDC154A6NI56 674 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 HSPB2A8KAH6 182 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 C9JVG2 144 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 POLR3GO15318 223 aaPredicted RBP10.74□□□□□ -0.69
YBX3-217ENST00000546164 PEPDP12955 493 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 ZNF17P17021 662 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 MAGEA8P43361 318 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 IRX1P78414 480 aaPredicted RBP10.74□□□□□ -0.69
YBX3-217ENST00000546164 LSM11P83369 360 aaKnown RBP eCLIP10.74□□□□□ -0.694e-8■□□□□ 8.6
YBX3-217ENST00000546164 TFF3Q07654 80 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 RCAN2Q14206 197 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 CD226Q15762 336 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 HSPB2Q16082 182 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 ARHGAP11BQ3KRB8 267 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 FLYWCH1Q4VC44 716 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 RAET1LQ5VY80 246 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 MIER2Q8N344 545 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 ZNF527Q8NB42 609 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 OR10Q1Q8NGQ4 319 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 MARK4Q96L34 752 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 SPOCK3Q9BQ16 436 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 TREX2Q9BQ50 279 aaPredicted RBP10.74□□□□□ -0.69
YBX3-217ENST00000546164 TUBA1CQ9BQE3 449 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 PIGQQ9BRB3 760 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 SLC35A5Q9BS91 424 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 INPP5KQ9BT40 448 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 ENKD1Q9H0I2 346 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 OR51I1Q9H343 314 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 POLE3Q9NRF9 147 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 EXD2Q9NVH0 621 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 TMEM45AQ9NWC5 275 aa10.74□□□□□ -0.69
YBX3-217ENST00000546164 RPH3AQ9Y2J0 694 aaPredicted RBP10.74□□□□□ -0.69
YBX3-217ENST00000546164 ANKHD1Q8IWZ3 2542 aaKnown RBP10.74□□□□□ -0.69
YBX3-217ENST00000546164 APCP25054 2843 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 DCHS2Q6V1P9 2916 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 FAM234BA2RU67 622 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 KDM4EB2RXH2 506 aaPredicted RBP10.73□□□□□ -0.69
YBX3-217ENST00000546164 H0Y3Z8 333 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 H3BNH8 94 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 C19orf84I3L1E1 186 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 RFXANKO14593 260 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 HCRTR2O43614 444 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 STX11O75558 287 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 ZCCHC18P0CG32 403 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 IGFBP2P18065 325 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 CHI3L1P36222 383 aaPredicted RBP10.73□□□□□ -0.69
YBX3-217ENST00000546164 CDKN2CP42773 168 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 STARP49675 285 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 KHKP50053 298 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 POLR2JP52435 117 aaKnown RBP10.73□□□□□ -0.69
YBX3-217ENST00000546164 AQP5P55064 265 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 SUMO3P55854 103 aaPredicted RBP10.73□□□□□ -0.69
YBX3-217ENST00000546164 ZNF141Q15928 474 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 SLC25A35Q3KQZ1 300 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.73□□□□□ -0.69
YBX3-217ENST00000546164 ATAD3BQ5T9A4 648 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 POMZP3Q6PJE2 187 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 ARSKQ6UWY0 536 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 LIX1LQ8IVB5 337 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 GTPBP8Q8N3Z3 284 aaPredicted RBP10.73□□□□□ -0.69
YBX3-217ENST00000546164 GATSQ8NAP1 163 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 NAXEQ8NCW5 288 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 TNIP2Q8NFZ5 429 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 OR9I1Q8NGQ6 314 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 WNT2BQ93097 391 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 ZBTB8AQ96BR9 441 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 TRIB1Q96RU8 372 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 EBF4Q9BQW3 602 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 SAP130Q9H0E3 1048 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 RUBCNLQ9H714 662 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 RMND5AQ9H871 391 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 KCNJ16Q9NPI9 418 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 CLCF1Q9UBD9 225 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 ZNF629Q9UEG4 869 aaPredicted RBP10.73□□□□□ -0.69
YBX3-217ENST00000546164 DTNAQ9Y4J8 743 aa10.73□□□□□ -0.69
YBX3-217ENST00000546164 NPIPA5A0A0B4J1W7 369 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 SERINC4A6NH21 518 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 FAM90A27PA6NNH2 459 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 CLCA1A8K7I4 914 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 NPIPA7E9PJI5 369 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 HMGN4O00479 90 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 KIAA0513O60268 411 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 FCMRO60667 390 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 EDF1O60869 148 aaKnown RBP10.72□□□□□ -0.69
YBX3-217ENST00000546164 IL18BPO95998 194 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 IL2RAP01589 272 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 NPIPA8P0DM63 369 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 OR12D1P0DN82 309 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 POU3F2P20265 443 aaPredicted RBP10.72□□□□□ -0.69
YBX3-217ENST00000546164 TCEA1P23193 301 aaKnown RBP10.72□□□□□ -0.69
YBX3-217ENST00000546164 PSMA4P25789 261 aaKnown RBP10.72□□□□□ -0.69
YBX3-217ENST00000546164 ANXA11P50995 505 aaKnown RBP10.72□□□□□ -0.69
YBX3-217ENST00000546164 ATP4BP51164 291 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 CLDN15P56746 228 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 EEFSECP57772 596 aaKnown RBP10.72□□□□□ -0.69
YBX3-217ENST00000546164 STX1BP61266 288 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 ZNF117Q03924 483 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 FUT5Q11128 374 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 PLPPR5Q32ZL2 321 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms