RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 ZNF26P17031 533 aaPredicted RBP8.09□□□□□ -1.12
CLIP1-218ENST00000545889 GRK5P34947 590 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 PRKXP51817 358 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 CTSCP53634 463 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 NCS1P62166 190 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 RHDQ02161 417 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 PCLAFQ15004 111 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 NKPD1Q17RQ9 610 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 RBM48Q5RL73 367 aaKnown RBP8.09□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF765Q7L2R6 523 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 KCTD20Q7Z5Y7 419 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 NOXA1Q86UR1 476 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 FAM160A2Q8N612 972 aaPredicted RBP8.09□□□□□ -1.12
CLIP1-218ENST00000545889 TP53I13Q8NBR0 393 aaPredicted RBP8.09□□□□□ -1.12
CLIP1-218ENST00000545889 CHTF18Q8WVB6 975 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 ZFPM2Q8WW38 1151 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF597Q96LX8 424 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 NSUN5Q96P11 429 aaKnown RBP8.09□□□□□ -1.12
CLIP1-218ENST00000545889 IFT22Q9H7X7 185 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 TRPV4Q9HBA0 871 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 FOXE1O00358 373 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 SLC22A1O15245 554 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 OR2T1O43869 369 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 TAS2R38P59533 333 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 UFM1P61960 85 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 DEFB109BQ30KR1 87 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 UGT3A2Q3SY77 523 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 NKAPLQ5M9Q1 402 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 PYHIN1Q6K0P9 492 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 PAPD4Q6PIY7 484 aaKnown RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 PLET1Q6UQ28 207 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 CYS1Q717R9 158 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 STX12Q86Y82 276 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 MINDY1Q8N5J2 469 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 GOT1L1Q8NHS2 421 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 ANGPTL6Q8NI99 470 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 TANKQ92844 425 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 GAL3ST3Q96A11 431 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 NEDD4LQ96PU5 975 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 KCNA7Q96RP8 456 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 PSD2Q9BQI7 771 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 HCAR1Q9BXC0 346 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 HES7Q9BYE0 225 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 C12orf10Q9HB07 376 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 DHCR7Q9UBM7 475 aaKnown RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 GNG8Q9UK08 70 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 TMEM14AQ9Y6G1 99 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 RNF215Q9Y6U7 377 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 TRAV20A0A0B4J274 112 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF99A8MXY4 864 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 SLC33A1O00400 549 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 KLF11O14901 512 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF888P0CJ79 500 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 IL9P15248 144 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 MPLP40238 635 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 CSNK1DP48730 415 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 SNU13P55769 128 aaKnown RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 CORO6Q6QEF8 472 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 RBMS3Q6XE24 437 aaKnown RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 MRPL21Q7Z2W9 205 aaKnown RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 LAS2Q8IYD9 372 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 CDRT4Q8N9R6 151 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 RCBTB1Q8NDN9 531 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 SIMC1Q8NDZ2 872 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 PROKR1Q8TCW9 393 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 KCNE4Q8WWG9 221 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 HS6ST2Q96MM7 605 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 AMDHD1Q96NU7 426 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 RANGRFQ9HD47 186 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 CD93Q9NPY3 652 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 SPHK1Q9NYA1 384 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 GLTPQ9NZD2 209 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 GPRC5BQ9NZH0 403 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 STOX2Q9P2F5 926 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 NAALAD2Q9Y3Q0 740 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 OR51B4Q9Y5P0 310 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 MROH6A6NGR9 719 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 SSR4P51571 173 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 C18orf21Q32NC0 220 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 C6orf15Q6UXA7 325 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 HMGN2P46Q86SG4 172 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF687Q8N1G0 1237 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 OR5K1Q8NHB7 308 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 THRSPQ92748 146 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 ASB9Q96DX5 294 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 ALG14Q96F25 216 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 MSLNLQ96KJ4 702 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 IP6K3Q96PC2 410 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 ELF4Q99607 663 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-218ENST00000545889 C20orf27Q9GZN8 174 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 DCSTAMPQ9H295 470 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 OR51I1Q9H343 314 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 KCNIP1Q9NZI2 227 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 CLEC1BQ9P126 229 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 ENPP5Q9UJA9 477 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 NEU3Q9UQ49 428 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 CACNA1EQ15878 2313 aa8.08□□□□□ -1.12
CLIP1-218ENST00000545889 BHMG1C9JSJ3 638 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-218ENST00000545889 TLX2O43763 284 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-218ENST00000545889 MRPL33O75394 65 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms