RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 GCM2O75603 506 aaPredicted RBP8.75□□□□□ -1.01
YBX3-215ENST00000544504 PPM1BO75688 479 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 IFNW1P05000 195 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 FESP07332 822 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 TBXA2RP21731 343 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 DCTP40126 519 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 ADH7P40394 386 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 SSR4P51571 173 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 MLLT10P55197 1068 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 GK3PQ14409 553 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 NNATQ16517 81 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 MEP1AQ16819 746 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 CCNJQ5T5M9 372 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 FAM69BQ5VUD6 431 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 ZNF787Q6DD87 383 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 TCTN3Q6NUS6 607 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 H3F3CQ6NXT2 135 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 CYP4Z1Q86W10 505 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 MISPQ8IVT2 679 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 ZNF440Q8IYI8 595 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 OR4N2Q8NGD1 307 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 CANT1Q8WVQ1 401 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 APOBEC4Q8WW27 367 aaKnown RBP8.75□□□□□ -1.01
YBX3-215ENST00000544504 PYDC1Q8WXC3 89 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 ZNF347Q96SE7 839 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 SECISBP2Q96T21 854 aaKnown RBP8.75□□□□□ -1.01
YBX3-215ENST00000544504 SEPHS2Q99611 448 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 POLR2J2Q9GZM3 115 aaKnown RBP8.75□□□□□ -1.01
YBX3-215ENST00000544504 LHPPQ9H008 270 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 POLR2J3Q9H1A7 115 aaKnown RBP8.75□□□□□ -1.01
YBX3-215ENST00000544504 RNPEPL1Q9HAU8 725 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 IL1RAPQ9NPH3 570 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 C6orf203Q9P0P8 240 aaPredicted RBP8.75□□□□□ -1.01
YBX3-215ENST00000544504 STX18Q9P2W9 335 aaKnown RBP8.75□□□□□ -1.01
YBX3-215ENST00000544504 ABCG2Q9UNQ0 655 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 ZNF443Q9Y2A4 671 aaPredicted RBP8.75□□□□□ -1.01
YBX3-215ENST00000544504 FAM32AQ9Y421 112 aaKnown RBP8.75□□□□□ -1.01
YBX3-215ENST00000544504 DTNAQ9Y4J8 743 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 MRPS18BQ9Y676 258 aaKnown RBP8.75□□□□□ -1.01
YBX3-215ENST00000544504 C2CD3Q4AC94 2353 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 DNHD1Q96M86 4753 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 CSMD2Q7Z408 3487 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 A1L4Q6 167 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 WWP2O00308 870 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 PRKNO60260 465 aaPredicted RBP8.74□□□□□ -1.01
YBX3-215ENST00000544504 DPM1O60762 260 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 ITGA10O75578 1167 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 UGT2B17O75795 530 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 OR2J2O76002 312 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 UTS2O95399 124 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 LGI1O95970 557 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 OPN1SWP03999 348 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 FABP3P05413 133 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 FBXO45P0C2W1 286 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 ITGAMP11215 1152 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 UQCRBP14927 111 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 CD247P20963 164 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 FASP25445 335 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 MAGEA2P43356 314 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 UQCRFS1P47985 274 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 SOX8P57073 446 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 MLF1P58340 268 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 SMIM11AP58511 58 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 KCNJ10P78508 379 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 RCN1Q15293 331 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 DUSP7Q16829 419 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 ABHD17BQ5VST6 288 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 ENPP6Q6UWR7 440 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 ZNF550Q7Z398 422 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 PIWIL3Q7Z3Z3 882 aaKnown RBP8.74□□□□□ -1.01
YBX3-215ENST00000544504 GALNT10Q86SR1 603 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 GRAMD2AQ8IUY3 354 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 ZDHHC21Q8IVQ6 265 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 TMEM156Q8N614 296 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 TEX19Q8NA77 164 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 SMYD1Q8NB12 490 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 GALNT11Q8NCW6 608 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 THAP3Q8WTV1 239 aaPredicted RBP8.74□□□□□ -1.01
YBX3-215ENST00000544504 ASB15Q8WXK1 588 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 EFHD2Q96C19 240 aaPredicted RBP8.74□□□□□ -1.01
YBX3-215ENST00000544504 SPACA9Q96E40 222 aaPredicted RBP8.74□□□□□ -1.01
YBX3-215ENST00000544504 DTNBP1Q96EV8 351 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 THOC3Q96J01 351 aaKnown RBP8.74□□□□□ -1.01
YBX3-215ENST00000544504 SGCZQ96LD1 299 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 RASL10BQ96S79 203 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 ADOQ96SZ5 270 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 MESP1Q9BRJ9 268 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 BDH2Q9BUT1 245 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 CHID1Q9BWS9 393 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 TBL1XR1Q9BZK7 514 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 SDHAF3Q9NRP4 125 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 V9GYQ6 96 aa8.74□□□□□ -1.01
YBX3-215ENST00000544504 PRRC2CQ9Y520 2896 aaKnown RBP8.74□□□□□ -1.01
YBX3-215ENST00000544504 SERINC4A6NH21 518 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 TMEM200CA6NKL6 621 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 ALG1L2C9J202 215 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 GNGT2O14610 69 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 AP3D1O14617 1153 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 ADAMDEC1O15204 470 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 FMO6PO60774 539 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms